Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural Networks
In many applications of tomography, the acquired data are limited in one or more ways due to unavoidable experimental constraints. In such cases, popular direct reconstruction algorithms tend to produce inaccurate images, and more accurate iterative algorithms often have prohibitively high computati...
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doaj-9c73422a48404e7e9b50001536d0a72e2020-11-24T20:50:42ZengMDPI AGJournal of Imaging2313-433X2018-10-0141112810.3390/jimaging4110128jimaging4110128Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural NetworksDaniël M. Pelt0Kees Joost Batenburg1James A. Sethian2Centrum Wiskunde & Informatica, Science Park 123, 1098 XG Amsterdam, The NetherlandsCentrum Wiskunde & Informatica, Science Park 123, 1098 XG Amsterdam, The NetherlandsDepartment of Mathematics, University of California, Berkeley, CA 94720, USAIn many applications of tomography, the acquired data are limited in one or more ways due to unavoidable experimental constraints. In such cases, popular direct reconstruction algorithms tend to produce inaccurate images, and more accurate iterative algorithms often have prohibitively high computational costs. Using machine learning to improve the image quality of direct algorithms is a recently proposed alternative, for which promising results have been shown. However, previous attempts have focused on using encoder⁻decoder networks, which have several disadvantages when applied to large tomographic images, preventing wide application in practice. Here, we propose the use of the Mixed-Scale Dense convolutional neural network architecture, which was specifically designed to avoid these disadvantages, to improve tomographic reconstruction from limited data. Results are shown for various types of data limitations and object types, for both simulated data and large-scale real-world experimental data. The results are compared with popular tomographic reconstruction algorithms and machine learning algorithms, showing that Mixed-Scale Dense networks are able to significantly improve reconstruction quality even with severely limited data, and produce more accurate results than existing algorithms.https://www.mdpi.com/2313-433X/4/11/128machine learningdeep learningimage reconstructiontomography |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Daniël M. Pelt Kees Joost Batenburg James A. Sethian |
spellingShingle |
Daniël M. Pelt Kees Joost Batenburg James A. Sethian Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural Networks Journal of Imaging machine learning deep learning image reconstruction tomography |
author_facet |
Daniël M. Pelt Kees Joost Batenburg James A. Sethian |
author_sort |
Daniël M. Pelt |
title |
Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural Networks |
title_short |
Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural Networks |
title_full |
Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural Networks |
title_fullStr |
Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural Networks |
title_full_unstemmed |
Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural Networks |
title_sort |
improving tomographic reconstruction from limited data using mixed-scale dense convolutional neural networks |
publisher |
MDPI AG |
series |
Journal of Imaging |
issn |
2313-433X |
publishDate |
2018-10-01 |
description |
In many applications of tomography, the acquired data are limited in one or more ways due to unavoidable experimental constraints. In such cases, popular direct reconstruction algorithms tend to produce inaccurate images, and more accurate iterative algorithms often have prohibitively high computational costs. Using machine learning to improve the image quality of direct algorithms is a recently proposed alternative, for which promising results have been shown. However, previous attempts have focused on using encoder⁻decoder networks, which have several disadvantages when applied to large tomographic images, preventing wide application in practice. Here, we propose the use of the Mixed-Scale Dense convolutional neural network architecture, which was specifically designed to avoid these disadvantages, to improve tomographic reconstruction from limited data. Results are shown for various types of data limitations and object types, for both simulated data and large-scale real-world experimental data. The results are compared with popular tomographic reconstruction algorithms and machine learning algorithms, showing that Mixed-Scale Dense networks are able to significantly improve reconstruction quality even with severely limited data, and produce more accurate results than existing algorithms. |
topic |
machine learning deep learning image reconstruction tomography |
url |
https://www.mdpi.com/2313-433X/4/11/128 |
work_keys_str_mv |
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