Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models
<p>Predicting future changes in ecosystem services is not only highly desirable but is also becoming feasible as several forces (e.g., available big data, developed data assimilation (DA) techniques, and advanced cyber-infrastructure) are converging to transform ecological research into quanti...
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Copernicus Publications
2019-03-01
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Series: | Geoscientific Model Development |
Online Access: | https://www.geosci-model-dev.net/12/1119/2019/gmd-12-1119-2019.pdf |
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DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Y. Huang Y. Huang M. Stacy J. Jiang J. Jiang N. Sundi S. Ma S. Ma V. Saruta V. Saruta C. G. Jung C. G. Jung Z. Shi J. Xia J. Xia P. J. Hanson D. Ricciuto Y. Luo Y. Luo Y. Luo |
spellingShingle |
Y. Huang Y. Huang M. Stacy J. Jiang J. Jiang N. Sundi S. Ma S. Ma V. Saruta V. Saruta C. G. Jung C. G. Jung Z. Shi J. Xia J. Xia P. J. Hanson D. Ricciuto Y. Luo Y. Luo Y. Luo Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models Geoscientific Model Development |
author_facet |
Y. Huang Y. Huang M. Stacy J. Jiang J. Jiang N. Sundi S. Ma S. Ma V. Saruta V. Saruta C. G. Jung C. G. Jung Z. Shi J. Xia J. Xia P. J. Hanson D. Ricciuto Y. Luo Y. Luo Y. Luo |
author_sort |
Y. Huang |
title |
Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models |
title_short |
Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models |
title_full |
Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models |
title_fullStr |
Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models |
title_full_unstemmed |
Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models |
title_sort |
realized ecological forecast through an interactive ecological platform for assimilating data (ecopad, v1.0) into models |
publisher |
Copernicus Publications |
series |
Geoscientific Model Development |
issn |
1991-959X 1991-9603 |
publishDate |
2019-03-01 |
description |
<p>Predicting future changes in ecosystem services is not only highly
desirable but is also becoming feasible as several forces (e.g., available big
data, developed data assimilation (DA) techniques, and advanced
cyber-infrastructure) are converging to transform ecological research into
quantitative forecasting. To realize ecological forecasting, we have
developed an Ecological Platform for
Assimilating Data (EcoPAD, v1.0) into models. EcoPAD (v1.0)
is a web-based software system that automates data transfer and processing
from sensor networks to ecological forecasting through data management,
model simulation, data assimilation, forecasting, and visualization. It
facilitates interactive data–model integration from which the model is
recursively improved through updated data while data are systematically
refined under the guidance of model. EcoPAD (v1.0) relies on data from
observations, process-oriented models, DA techniques, and the web-based
workflow.</p>
<p>We applied EcoPAD (v1.0) to the Spruce and Peatland Responses Under Climatic
and Environmental change (SPRUCE) experiment in northern Minnesota. The
EcoPAD-SPRUCE realizes fully automated data transfer, feeds meteorological
data to drive model simulations, assimilates both manually measured and
automated sensor data into the Terrestrial ECOsystem (TECO) model, and
recursively forecasts the responses of various biophysical and biogeochemical
processes to five temperature and two <span class="inline-formula">CO<sub>2</sub></span> treatments in near-real time
(weekly). Forecasting with EcoPAD-SPRUCE has revealed that mismatches in
forecasting carbon pool dynamics are more related to model (e.g., model
structure, parameter, and initial value) than forcing variables, opposite to
forecasting flux variables. EcoPAD-SPRUCE quantified acclimations of methane
production in response to warming treatments through shifted posterior
distributions of the <span class="inline-formula">CH<sub>4</sub>:CO<sub>2</sub></span> ratio and the temperature sensitivity
(<span class="inline-formula"><i>Q</i><sub>10</sub></span>) of methane production towards lower values. Different case
studies indicated that realistic forecasting of carbon dynamics relies on
appropriate model structure, correct parameterization, and accurate external
forcing. Moreover, EcoPAD-SPRUCE stimulated active feedbacks between
experimenters and modelers to identify model components to be improved<span id="page1120"/> and
additional measurements to be taken. It has become an interactive
model–experiment (ModEx) system and opens a novel avenue for interactive
dialogue between modelers and experimenters. Altogether, EcoPAD (v1.0) acts
to integrate multiple sources of information and knowledge to best inform
ecological forecasting.</p> |
url |
https://www.geosci-model-dev.net/12/1119/2019/gmd-12-1119-2019.pdf |
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doaj-9c72c8e16f9b486e97773778a8661a5a2020-11-24T21:00:33ZengCopernicus PublicationsGeoscientific Model Development1991-959X1991-96032019-03-01121119113710.5194/gmd-12-1119-2019Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into modelsY. Huang0Y. Huang1M. Stacy2J. Jiang3J. Jiang4N. Sundi5S. Ma6S. Ma7V. Saruta8V. Saruta9C. G. Jung10C. G. Jung11Z. Shi12J. Xia13J. Xia14P. J. Hanson15D. Ricciuto16Y. Luo17Y. Luo18Y. Luo19Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USALaboratoire des Sciences du Climat et de l'Environnement, 91191 Gif-sur-Yvette, FranceUniversity of Oklahoma Information Technology, Norman, Oklahoma, USADepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USAKey Laboratory of Soil and Water Conservation and Ecological Restoration in Jiangsu Province, Collaborative Innovation Center of Sustainable Forestry in Southern China of Jiangsu Province, Nanjing Forestry University, Nanjing, Jiangsu, ChinaDepartment of Computer Science, University of Oklahoma, Norman, Oklahoma, USADepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USACenter for Ecosystem Science and Society, Northern Arizona University, Flagstaff, Arizona, USADepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USACenter for Ecosystem Science and Society, Northern Arizona University, Flagstaff, Arizona, USADepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USACenter for Ecosystem Science and Society, Northern Arizona University, Flagstaff, Arizona, USADepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USATiantong National Forest Ecosystem Observation and Research Station, School of Ecological and Environmental Sciences, East China Normal University, Shanghai 200062, ChinaResearch Center for Global Change and Ecological Forecasting, East China Normal University, Shanghai 200062, ChinaEnvironmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USAEnvironmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USADepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USACenter for Ecosystem Science and Society, Northern Arizona University, Flagstaff, Arizona, USADepartment of Earth System Science, Tsinghua University, Beijing 100084, China<p>Predicting future changes in ecosystem services is not only highly desirable but is also becoming feasible as several forces (e.g., available big data, developed data assimilation (DA) techniques, and advanced cyber-infrastructure) are converging to transform ecological research into quantitative forecasting. To realize ecological forecasting, we have developed an Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models. EcoPAD (v1.0) is a web-based software system that automates data transfer and processing from sensor networks to ecological forecasting through data management, model simulation, data assimilation, forecasting, and visualization. It facilitates interactive data–model integration from which the model is recursively improved through updated data while data are systematically refined under the guidance of model. EcoPAD (v1.0) relies on data from observations, process-oriented models, DA techniques, and the web-based workflow.</p> <p>We applied EcoPAD (v1.0) to the Spruce and Peatland Responses Under Climatic and Environmental change (SPRUCE) experiment in northern Minnesota. The EcoPAD-SPRUCE realizes fully automated data transfer, feeds meteorological data to drive model simulations, assimilates both manually measured and automated sensor data into the Terrestrial ECOsystem (TECO) model, and recursively forecasts the responses of various biophysical and biogeochemical processes to five temperature and two <span class="inline-formula">CO<sub>2</sub></span> treatments in near-real time (weekly). Forecasting with EcoPAD-SPRUCE has revealed that mismatches in forecasting carbon pool dynamics are more related to model (e.g., model structure, parameter, and initial value) than forcing variables, opposite to forecasting flux variables. EcoPAD-SPRUCE quantified acclimations of methane production in response to warming treatments through shifted posterior distributions of the <span class="inline-formula">CH<sub>4</sub>:CO<sub>2</sub></span> ratio and the temperature sensitivity (<span class="inline-formula"><i>Q</i><sub>10</sub></span>) of methane production towards lower values. Different case studies indicated that realistic forecasting of carbon dynamics relies on appropriate model structure, correct parameterization, and accurate external forcing. Moreover, EcoPAD-SPRUCE stimulated active feedbacks between experimenters and modelers to identify model components to be improved<span id="page1120"/> and additional measurements to be taken. It has become an interactive model–experiment (ModEx) system and opens a novel avenue for interactive dialogue between modelers and experimenters. Altogether, EcoPAD (v1.0) acts to integrate multiple sources of information and knowledge to best inform ecological forecasting.</p>https://www.geosci-model-dev.net/12/1119/2019/gmd-12-1119-2019.pdf |