Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?

When considering microbial biotic interactions, viruses as well as eukaryotic grazers are known to be important components of aquatic microbial food webs. It might be the same for bacterivorous bacteria but these groups have been comparatively less studied. This is typically the case of the Bdellovi...

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Main Authors: Jade A. Ezzedine, Louis Jacas, Yves Desdevises, Stéphan Jacquet
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-02-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2020.00098/full
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spelling doaj-9b5a0a3f117943adaceb494c0403485f2020-11-25T03:05:26ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-02-011110.3389/fmicb.2020.00098507411Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?Jade A. Ezzedine0Louis Jacas1Yves Desdevises2Stéphan Jacquet3Université Savoie Mont-Blanc, INRAE, CARRTEL, Thonon-les-Bains, FranceUniversité Savoie Mont-Blanc, INRAE, CARRTEL, Thonon-les-Bains, FranceCNRS, Biologie Intégrative des Organismes Marins, Observatoire Océanologique, Sorbonne Université, Banyuls-sur-Mer, FranceUniversité Savoie Mont-Blanc, INRAE, CARRTEL, Thonon-les-Bains, FranceWhen considering microbial biotic interactions, viruses as well as eukaryotic grazers are known to be important components of aquatic microbial food webs. It might be the same for bacterivorous bacteria but these groups have been comparatively less studied. This is typically the case of the Bdellovibrio and like organisms (BALOs), which are obligate bacterial predators of other bacteria. Recently, the abundance and distribution of three families of this functional group were investigated in perialpine lakes, revealing their presence and quantitative importance. Here, a more in-depth analysis is provided for Lake Geneva regarding the diversity of these bacterial predators at different seasons, sites and depths. We reveal a seasonal and spatial (vertical) pattern for BALOs. They were also found to be relatively diverse (especially Bdellovibrionaceae) and assigned to both known and unknown phylogenetic clusters. At last we found that most BALOs were positively correlated to other bacterial groups, mainly Gram-negative, in particular Myxococcales (among which many are predators of other microbes). This study is the first shedding light on this potentially important bacterial killing group in a large and deep lake.https://www.frontiersin.org/article/10.3389/fmicb.2020.00098/fullBdellovibrio and like organismsmyxobacteriapredatory bacteriamicrobial loopLake Genevametabarcoding
collection DOAJ
language English
format Article
sources DOAJ
author Jade A. Ezzedine
Louis Jacas
Yves Desdevises
Stéphan Jacquet
spellingShingle Jade A. Ezzedine
Louis Jacas
Yves Desdevises
Stéphan Jacquet
Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?
Frontiers in Microbiology
Bdellovibrio and like organisms
myxobacteria
predatory bacteria
microbial loop
Lake Geneva
metabarcoding
author_facet Jade A. Ezzedine
Louis Jacas
Yves Desdevises
Stéphan Jacquet
author_sort Jade A. Ezzedine
title Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?
title_short Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?
title_full Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?
title_fullStr Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?
title_full_unstemmed Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?
title_sort bdellovibrio and like organisms in lake geneva: an unseen elephant in the room?
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2020-02-01
description When considering microbial biotic interactions, viruses as well as eukaryotic grazers are known to be important components of aquatic microbial food webs. It might be the same for bacterivorous bacteria but these groups have been comparatively less studied. This is typically the case of the Bdellovibrio and like organisms (BALOs), which are obligate bacterial predators of other bacteria. Recently, the abundance and distribution of three families of this functional group were investigated in perialpine lakes, revealing their presence and quantitative importance. Here, a more in-depth analysis is provided for Lake Geneva regarding the diversity of these bacterial predators at different seasons, sites and depths. We reveal a seasonal and spatial (vertical) pattern for BALOs. They were also found to be relatively diverse (especially Bdellovibrionaceae) and assigned to both known and unknown phylogenetic clusters. At last we found that most BALOs were positively correlated to other bacterial groups, mainly Gram-negative, in particular Myxococcales (among which many are predators of other microbes). This study is the first shedding light on this potentially important bacterial killing group in a large and deep lake.
topic Bdellovibrio and like organisms
myxobacteria
predatory bacteria
microbial loop
Lake Geneva
metabarcoding
url https://www.frontiersin.org/article/10.3389/fmicb.2020.00098/full
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