Multi-omics integration accurately predicts cellular state in unexplored conditions for Escherichia coli

Multi-omics data integration is a great challenge. Here, the authors compile a database of E. coliproteomics, transcriptomics, metabolomics and fluxomics data to train models of recurrent neural network and constrained regression, enabling prediction of bacterial responses to perturbations.

Bibliographic Details
Main Authors: Minseung Kim, Navneet Rai, Violeta Zorraquino, Ilias Tagkopoulos
Format: Article
Language:English
Published: Nature Publishing Group 2016-10-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/ncomms13090
Description
Summary:Multi-omics data integration is a great challenge. Here, the authors compile a database of E. coliproteomics, transcriptomics, metabolomics and fluxomics data to train models of recurrent neural network and constrained regression, enabling prediction of bacterial responses to perturbations.
ISSN:2041-1723