Investigation of Antimicrobial Peptide Genes Associated with Fungus and Insect Resistance in Maize

Antimicrobial peptides (AMPs) are small defense proteins present in various organisms. Major groups of AMPs include beta-barrelin, hevein, knottin, lipid transfer protein (LTP), thionin, defensin, snakin, and cyclotide. Most plant AMPs involve host plant resistance to pathogens such as fungi, viruse...

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Main Authors: Joseph Noonan, William Paul Williams, Xueyan Shan
Format: Article
Language:English
Published: MDPI AG 2017-09-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/18/9/1938
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spelling doaj-99e19e523e05478aa6c7aa73ec3189ee2020-11-25T00:09:36ZengMDPI AGInternational Journal of Molecular Sciences1422-00672017-09-01189193810.3390/ijms18091938ijms18091938Investigation of Antimicrobial Peptide Genes Associated with Fungus and Insect Resistance in MaizeJoseph Noonan0William Paul Williams1Xueyan Shan2Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Mississippi State, MS 39762, USAUSDA-ARS, Corn Host Plant Resistance Research Unit, Mississippi State, MS 39762, USADepartment of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Mississippi State, MS 39762, USAAntimicrobial peptides (AMPs) are small defense proteins present in various organisms. Major groups of AMPs include beta-barrelin, hevein, knottin, lipid transfer protein (LTP), thionin, defensin, snakin, and cyclotide. Most plant AMPs involve host plant resistance to pathogens such as fungi, viruses, and bacteria, whereas a few plant AMPs from the cyclotide family carry insecticidal functions. In this research, a genome-wide investigation on antimicrobial peptide genes in maize genome was conducted. AMPs previously identified from various plant species were used as query sequences for maize genome data mining. Thirty-nine new maize AMPs were identified in addition to seven known maize AMPs. Protein sequence analysis revealed 10 distinguishable maize AMP groups. Analysis of mRNA expression of maize AMP genes by quantitative real-time polymerase chain reaction (qRT-PCR) revealed different expression patterns in a panel of 10 maize inbred lines. Five maize AMP genes were found significantly associated with insect or fungus resistance. Identification of maize antimicrobial peptide genes will facilitate the breeding of host plant resistance and improve maize production.https://www.mdpi.com/1422-0067/18/9/1938plant antimicrobial peptidesdefensinheveinsnakincyclotidemaizehost plant resistance
collection DOAJ
language English
format Article
sources DOAJ
author Joseph Noonan
William Paul Williams
Xueyan Shan
spellingShingle Joseph Noonan
William Paul Williams
Xueyan Shan
Investigation of Antimicrobial Peptide Genes Associated with Fungus and Insect Resistance in Maize
International Journal of Molecular Sciences
plant antimicrobial peptides
defensin
hevein
snakin
cyclotide
maize
host plant resistance
author_facet Joseph Noonan
William Paul Williams
Xueyan Shan
author_sort Joseph Noonan
title Investigation of Antimicrobial Peptide Genes Associated with Fungus and Insect Resistance in Maize
title_short Investigation of Antimicrobial Peptide Genes Associated with Fungus and Insect Resistance in Maize
title_full Investigation of Antimicrobial Peptide Genes Associated with Fungus and Insect Resistance in Maize
title_fullStr Investigation of Antimicrobial Peptide Genes Associated with Fungus and Insect Resistance in Maize
title_full_unstemmed Investigation of Antimicrobial Peptide Genes Associated with Fungus and Insect Resistance in Maize
title_sort investigation of antimicrobial peptide genes associated with fungus and insect resistance in maize
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2017-09-01
description Antimicrobial peptides (AMPs) are small defense proteins present in various organisms. Major groups of AMPs include beta-barrelin, hevein, knottin, lipid transfer protein (LTP), thionin, defensin, snakin, and cyclotide. Most plant AMPs involve host plant resistance to pathogens such as fungi, viruses, and bacteria, whereas a few plant AMPs from the cyclotide family carry insecticidal functions. In this research, a genome-wide investigation on antimicrobial peptide genes in maize genome was conducted. AMPs previously identified from various plant species were used as query sequences for maize genome data mining. Thirty-nine new maize AMPs were identified in addition to seven known maize AMPs. Protein sequence analysis revealed 10 distinguishable maize AMP groups. Analysis of mRNA expression of maize AMP genes by quantitative real-time polymerase chain reaction (qRT-PCR) revealed different expression patterns in a panel of 10 maize inbred lines. Five maize AMP genes were found significantly associated with insect or fungus resistance. Identification of maize antimicrobial peptide genes will facilitate the breeding of host plant resistance and improve maize production.
topic plant antimicrobial peptides
defensin
hevein
snakin
cyclotide
maize
host plant resistance
url https://www.mdpi.com/1422-0067/18/9/1938
work_keys_str_mv AT josephnoonan investigationofantimicrobialpeptidegenesassociatedwithfungusandinsectresistanceinmaize
AT williampaulwilliams investigationofantimicrobialpeptidegenesassociatedwithfungusandinsectresistanceinmaize
AT xueyanshan investigationofantimicrobialpeptidegenesassociatedwithfungusandinsectresistanceinmaize
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