Identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (AMI) using bioinformatics strategy

Acute myocardial infarction (AMI) was considered a fatal disease resulting in high morbidity and mortality; platelet activation or aggregation plays a critical role in participating in the pathogenesis of AMI. The current study aimed to reveal the underlying mechanisms of platelets in the confrontat...

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Main Authors: Yun Xie, Yi Wang, Linjun Zhao, Fang Wang, Jinyan Fang
Format: Article
Language:English
Published: Taylor & Francis Group 2021-01-01
Series:Bioengineered
Subjects:
fn1
Online Access:http://dx.doi.org/10.1080/21655979.2021.1937906
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spelling doaj-985be449ac414c14bc481a143a2f92992021-07-15T13:47:55ZengTaylor & Francis GroupBioengineered2165-59792165-59872021-01-011212890290510.1080/21655979.2021.19379061937906Identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (AMI) using bioinformatics strategyYun Xie0Yi Wang1Linjun Zhao2Fang Wang3Jinyan Fang4Affiliated Hangzhou First People’s Hospital, Zhejiang University School of MedicineAffiliated Hangzhou First People’s Hospital, Zhejiang University School of MedicineAffiliated Hangzhou First People’s Hospital, Zhejiang University School of MedicineAffiliated Hangzhou First People’s Hospital, Zhejiang University School of MedicineAffiliated Hangzhou First People’s Hospital, Zhejiang University School of MedicineAcute myocardial infarction (AMI) was considered a fatal disease resulting in high morbidity and mortality; platelet activation or aggregation plays a critical role in participating in the pathogenesis of AMI. The current study aimed to reveal the underlying mechanisms of platelets in the confrontation of AMI and potential biomarkers that separate AMI from other cardiovascular diseases and healthy people with bioinformatic strategies. Immunity analysis revealed that the neutrophil was significantly decreased in patients with SCAD compared with patients with ST-segment elevation myocardial infarction (STEMI) or healthy controls; monocytes and neutrophils showed potential in distinguishing patients with STEMI from patients with SCAD. Six differentially expressed genes (DEGs) showed great performances in differentiating STEMI patients from SCAD patients with AUC greater than 0.9. Correlation analysis showed that these six DEGs were significantly positively correlated with neutrophils; three genes were negatively correlated with monocytes. Weighted gene co-expression network analysis (WGCNA) found that module ‘royalblue’ had the highest correlation with STEMI; genes in STEMI-related module were enriched in cell–cell interactions, blood vessels’ biological processes, and peroxisome proliferator-activated receptor (PPAR) signaling pathway; four genes (FN1, CD34, LPL, and WWTR1) represented the capability of identifying patients with STEMI from healthy controls and patients with SCAD; two genes (ARG1 and NAMPTL) were considered as novel biomarkers for identifying STEMI from SCAD; FN1 represented the potential as a novel biomarker for STEMI. Our findings indicated that the distribution of neutrophils could be considered as a potential molecular trait for separating patients with STEMI from SCAD.http://dx.doi.org/10.1080/21655979.2021.1937906neutrophilsstemiscadarg1namptlfn1
collection DOAJ
language English
format Article
sources DOAJ
author Yun Xie
Yi Wang
Linjun Zhao
Fang Wang
Jinyan Fang
spellingShingle Yun Xie
Yi Wang
Linjun Zhao
Fang Wang
Jinyan Fang
Identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (AMI) using bioinformatics strategy
Bioengineered
neutrophils
stemi
scad
arg1
namptl
fn1
author_facet Yun Xie
Yi Wang
Linjun Zhao
Fang Wang
Jinyan Fang
author_sort Yun Xie
title Identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (AMI) using bioinformatics strategy
title_short Identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (AMI) using bioinformatics strategy
title_full Identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (AMI) using bioinformatics strategy
title_fullStr Identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (AMI) using bioinformatics strategy
title_full_unstemmed Identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (AMI) using bioinformatics strategy
title_sort identification of potential biomarkers and immune cell infiltration in acute myocardial infarction (ami) using bioinformatics strategy
publisher Taylor & Francis Group
series Bioengineered
issn 2165-5979
2165-5987
publishDate 2021-01-01
description Acute myocardial infarction (AMI) was considered a fatal disease resulting in high morbidity and mortality; platelet activation or aggregation plays a critical role in participating in the pathogenesis of AMI. The current study aimed to reveal the underlying mechanisms of platelets in the confrontation of AMI and potential biomarkers that separate AMI from other cardiovascular diseases and healthy people with bioinformatic strategies. Immunity analysis revealed that the neutrophil was significantly decreased in patients with SCAD compared with patients with ST-segment elevation myocardial infarction (STEMI) or healthy controls; monocytes and neutrophils showed potential in distinguishing patients with STEMI from patients with SCAD. Six differentially expressed genes (DEGs) showed great performances in differentiating STEMI patients from SCAD patients with AUC greater than 0.9. Correlation analysis showed that these six DEGs were significantly positively correlated with neutrophils; three genes were negatively correlated with monocytes. Weighted gene co-expression network analysis (WGCNA) found that module ‘royalblue’ had the highest correlation with STEMI; genes in STEMI-related module were enriched in cell–cell interactions, blood vessels’ biological processes, and peroxisome proliferator-activated receptor (PPAR) signaling pathway; four genes (FN1, CD34, LPL, and WWTR1) represented the capability of identifying patients with STEMI from healthy controls and patients with SCAD; two genes (ARG1 and NAMPTL) were considered as novel biomarkers for identifying STEMI from SCAD; FN1 represented the potential as a novel biomarker for STEMI. Our findings indicated that the distribution of neutrophils could be considered as a potential molecular trait for separating patients with STEMI from SCAD.
topic neutrophils
stemi
scad
arg1
namptl
fn1
url http://dx.doi.org/10.1080/21655979.2021.1937906
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