Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in Tunisia
An extremely halophilic archaeon, strain ETD6, was isolated from a marine solar saltern in Sfax, Tunisia. Analysis of the 16S rRNA gene sequence showed that the isolate was phylogenetically related to species of the genus Halorubrum among the family Halobacteriaceae, with a close relationship to Hrr...
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doaj-97cfbdcd491f4629b0ed9f62a60865922021-07-02T06:58:48ZengHindawi LimitedInternational Journal of Microbiology1687-918X1687-91982011-01-01201110.1155/2011/240191240191Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in TunisiaHana Trigui0Salma Masmoudi1Céline Brochier-Armanet2Sami Maalej3Sam Dukan4Laboratoire de Chimie Bactérienne, Aix Marseille Université, UPR 9043-CNRS, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, FranceLaboratoire de Microbiologie, Faculté des Sciences de Sfax, BP802, Sfax 3000, TunisiaLaboratoire de Chimie Bactérienne, Aix Marseille Université, UPR 9043-CNRS, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, FranceLaboratoire de Microbiologie, Faculté des Sciences de Sfax, BP802, Sfax 3000, TunisiaLaboratoire de Chimie Bactérienne, Aix Marseille Université, UPR 9043-CNRS, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, FranceAn extremely halophilic archaeon, strain ETD6, was isolated from a marine solar saltern in Sfax, Tunisia. Analysis of the 16S rRNA gene sequence showed that the isolate was phylogenetically related to species of the genus Halorubrum among the family Halobacteriaceae, with a close relationship to Hrr. xinjiangense (99.77% of identity). However, value for DNA-DNA hybridization between strain ETD6 and Hrr.xinjiangense were about 24.5%. The G+C content of the genomic DNA was 65.1 mol% (T(m)). Strain ETD6 grew in 15–35% (w/v) NaCl. The temperature and pH ranges for growth were 20–55°C and 6–9, respectively. Optimal growth occurred at 25% NaCl, 37°C, and pH 7.4. The results of the DNA hybridization against Hrr. xinjiangense and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain ETD6 from other Hrr. species. Therefore, strain ETD6 represents a novel species of the genus Halorubrum, for which the name Hrr. sfaxense sp. nov. is proposed. The Genbank EMBL-EBI accession number is GU724599.http://dx.doi.org/10.1155/2011/240191 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hana Trigui Salma Masmoudi Céline Brochier-Armanet Sami Maalej Sam Dukan |
spellingShingle |
Hana Trigui Salma Masmoudi Céline Brochier-Armanet Sami Maalej Sam Dukan Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in Tunisia International Journal of Microbiology |
author_facet |
Hana Trigui Salma Masmoudi Céline Brochier-Armanet Sami Maalej Sam Dukan |
author_sort |
Hana Trigui |
title |
Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in Tunisia |
title_short |
Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in Tunisia |
title_full |
Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in Tunisia |
title_fullStr |
Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in Tunisia |
title_full_unstemmed |
Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in Tunisia |
title_sort |
characterization of halorubrum sfaxense sp. nov., a new halophilic archaeon isolated from the solar saltern of sfax in tunisia |
publisher |
Hindawi Limited |
series |
International Journal of Microbiology |
issn |
1687-918X 1687-9198 |
publishDate |
2011-01-01 |
description |
An extremely halophilic archaeon, strain ETD6, was isolated from a marine solar saltern in Sfax, Tunisia. Analysis of the 16S rRNA gene sequence showed that the isolate was phylogenetically related to species of the genus Halorubrum among the family Halobacteriaceae, with a close relationship to Hrr. xinjiangense (99.77%
of identity). However, value for DNA-DNA hybridization between strain ETD6 and Hrr.xinjiangense were about 24.5%. The G+C content of the genomic DNA was 65.1 mol%
(T(m)). Strain ETD6 grew in 15–35%
(w/v) NaCl. The temperature and pH ranges for growth were 20–55°C and 6–9, respectively. Optimal growth occurred at 25%
NaCl, 37°C, and pH 7.4. The results of the DNA hybridization against Hrr. xinjiangense and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain ETD6 from other Hrr. species. Therefore, strain ETD6 represents a novel species of the genus Halorubrum, for which the name Hrr. sfaxense sp. nov. is proposed. The Genbank EMBL-EBI accession number is GU724599. |
url |
http://dx.doi.org/10.1155/2011/240191 |
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