COI barcode versus morphological identification of Culex ( Culex ) (Diptera: Culicidae) species: a case study using samples from Argentina and Brazil

Sequences of the cytochrome c oxidase subunit I (COI) mitochondrial gene from adults of 22 Culex ( Culex ) species from Argentina and Brazil were employed to assess species identification and to test the usefulness of COI for barcoding using the best close match (BCM) algorithm. A pairwise Kimura tw...

Full description

Bibliographic Details
Main Authors: Magdalena Laurito, Tatiane MP de Oliveira, Walter Ricardo Almiron, Maria Anice Mureb Sallum
Format: Article
Language:English
Published: Instituto Oswaldo Cruz, Ministério da Saúde 2013-01-01
Series:Memórias do Instituto Oswaldo Cruz.
Subjects:
COI
Online Access:http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000900110&lng=en&tlng=en
id doaj-961f2a34cc014862a582b5b0fafe2664
record_format Article
spelling doaj-961f2a34cc014862a582b5b0fafe26642020-11-25T00:44:14ZengInstituto Oswaldo Cruz, Ministério da SaúdeMemórias do Instituto Oswaldo Cruz.1678-80602013-01-01108suppl 111012210.1590/0074-0276130457S0074-02762013000900110COI barcode versus morphological identification of Culex ( Culex ) (Diptera: Culicidae) species: a case study using samples from Argentina and BrazilMagdalena LauritoTatiane MP de OliveiraWalter Ricardo AlmironMaria Anice Mureb SallumSequences of the cytochrome c oxidase subunit I (COI) mitochondrial gene from adults of 22 Culex ( Culex ) species from Argentina and Brazil were employed to assess species identification and to test the usefulness of COI for barcoding using the best close match (BCM) algorithm. A pairwise Kimura two-parameter distance matrix including the mean intra and interspecific distances for 71 COI barcode sequences was constructed. Of the 12 COI lineages recovered in the Neighbour-joining topology, five confirmed recognised morphological species ( Cx. acharistus , Cx. chidesteri , Cx. dolosus , Cx. lygrus and Cx. saltanensis ) with intraspecific divergences lower than 1.75%. Cx. bilineatus is formally resurrected from the synonymy of Cx. dolosus . Cx. maxi , Cx. surinamensis and the Coronator group species included were clustered into an unresolved lineage. The intraspecific distance of Cx. pipiens (3%) was almost twice the interspecific between it and Cx. quinquefasciatus (1.6%). Regarding the BCM criteria, the COI barcode successfully identified 69% of all species. The rest of the sequences, approximately 10%, 18% and 3%, remained as ambiguously, mis and unidentified, respectively. The COI barcode does not contain enough information to distinguish Culex ( Cux. ) species.http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000900110&lng=en&tlng=enCulexidentificationCOImorphologygenetic divergence
collection DOAJ
language English
format Article
sources DOAJ
author Magdalena Laurito
Tatiane MP de Oliveira
Walter Ricardo Almiron
Maria Anice Mureb Sallum
spellingShingle Magdalena Laurito
Tatiane MP de Oliveira
Walter Ricardo Almiron
Maria Anice Mureb Sallum
COI barcode versus morphological identification of Culex ( Culex ) (Diptera: Culicidae) species: a case study using samples from Argentina and Brazil
Memórias do Instituto Oswaldo Cruz.
Culex
identification
COI
morphology
genetic divergence
author_facet Magdalena Laurito
Tatiane MP de Oliveira
Walter Ricardo Almiron
Maria Anice Mureb Sallum
author_sort Magdalena Laurito
title COI barcode versus morphological identification of Culex ( Culex ) (Diptera: Culicidae) species: a case study using samples from Argentina and Brazil
title_short COI barcode versus morphological identification of Culex ( Culex ) (Diptera: Culicidae) species: a case study using samples from Argentina and Brazil
title_full COI barcode versus morphological identification of Culex ( Culex ) (Diptera: Culicidae) species: a case study using samples from Argentina and Brazil
title_fullStr COI barcode versus morphological identification of Culex ( Culex ) (Diptera: Culicidae) species: a case study using samples from Argentina and Brazil
title_full_unstemmed COI barcode versus morphological identification of Culex ( Culex ) (Diptera: Culicidae) species: a case study using samples from Argentina and Brazil
title_sort coi barcode versus morphological identification of culex ( culex ) (diptera: culicidae) species: a case study using samples from argentina and brazil
publisher Instituto Oswaldo Cruz, Ministério da Saúde
series Memórias do Instituto Oswaldo Cruz.
issn 1678-8060
publishDate 2013-01-01
description Sequences of the cytochrome c oxidase subunit I (COI) mitochondrial gene from adults of 22 Culex ( Culex ) species from Argentina and Brazil were employed to assess species identification and to test the usefulness of COI for barcoding using the best close match (BCM) algorithm. A pairwise Kimura two-parameter distance matrix including the mean intra and interspecific distances for 71 COI barcode sequences was constructed. Of the 12 COI lineages recovered in the Neighbour-joining topology, five confirmed recognised morphological species ( Cx. acharistus , Cx. chidesteri , Cx. dolosus , Cx. lygrus and Cx. saltanensis ) with intraspecific divergences lower than 1.75%. Cx. bilineatus is formally resurrected from the synonymy of Cx. dolosus . Cx. maxi , Cx. surinamensis and the Coronator group species included were clustered into an unresolved lineage. The intraspecific distance of Cx. pipiens (3%) was almost twice the interspecific between it and Cx. quinquefasciatus (1.6%). Regarding the BCM criteria, the COI barcode successfully identified 69% of all species. The rest of the sequences, approximately 10%, 18% and 3%, remained as ambiguously, mis and unidentified, respectively. The COI barcode does not contain enough information to distinguish Culex ( Cux. ) species.
topic Culex
identification
COI
morphology
genetic divergence
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000900110&lng=en&tlng=en
work_keys_str_mv AT magdalenalaurito coibarcodeversusmorphologicalidentificationofculexculexdipteraculicidaespeciesacasestudyusingsamplesfromargentinaandbrazil
AT tatianempdeoliveira coibarcodeversusmorphologicalidentificationofculexculexdipteraculicidaespeciesacasestudyusingsamplesfromargentinaandbrazil
AT walterricardoalmiron coibarcodeversusmorphologicalidentificationofculexculexdipteraculicidaespeciesacasestudyusingsamplesfromargentinaandbrazil
AT mariaanicemurebsallum coibarcodeversusmorphologicalidentificationofculexculexdipteraculicidaespeciesacasestudyusingsamplesfromargentinaandbrazil
_version_ 1725275545509298176