Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.

Horizontal gene transfer (HGT) is a major force driving bacterial evolution. Because of their ability to cross inter-species barriers, bacterial plasmids are essential agents for HGT. This ability, however, poses specific requisites on plasmid physiology, in particular the need to overcome a multile...

Full description

Bibliographic Details
Main Authors: Raul Fernandez-Lopez, Irene Del Campo, Carlos Revilla, Ana Cuevas, Fernando de la Cruz
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2014-02-01
Series:PLoS Genetics
Online Access:http://europepmc.org/articles/PMC3937220?pdf=render
id doaj-95ed025edc814204822ac4242fd1e147
record_format Article
spelling doaj-95ed025edc814204822ac4242fd1e1472020-11-24T21:36:54ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042014-02-01102e100417110.1371/journal.pgen.1004171Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.Raul Fernandez-LopezIrene Del CampoCarlos RevillaAna CuevasFernando de la CruzHorizontal gene transfer (HGT) is a major force driving bacterial evolution. Because of their ability to cross inter-species barriers, bacterial plasmids are essential agents for HGT. This ability, however, poses specific requisites on plasmid physiology, in particular the need to overcome a multilevel selection process with opposing demands. We analyzed the transcriptional network of plasmid R388, one of the most promiscuous plasmids in Proteobacteria. Transcriptional analysis by fluorescence expression profiling and quantitative PCR revealed a regulatory network controlled by six transcriptional repressors. The regulatory network relied on strong promoters, which were tightly repressed in negative feedback loops. Computational simulations and theoretical analysis indicated that this architecture would show a transcriptional burst after plasmid conjugation, linking the magnitude of the feedback gain with the intensity of the transcriptional burst. Experimental analysis showed that transcriptional overshooting occurred when the plasmid invaded a new population of susceptible cells. We propose that transcriptional overshooting allows genome rebooting after horizontal gene transfer, and might have an adaptive role in overcoming the opposing demands of multilevel selection.http://europepmc.org/articles/PMC3937220?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Raul Fernandez-Lopez
Irene Del Campo
Carlos Revilla
Ana Cuevas
Fernando de la Cruz
spellingShingle Raul Fernandez-Lopez
Irene Del Campo
Carlos Revilla
Ana Cuevas
Fernando de la Cruz
Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.
PLoS Genetics
author_facet Raul Fernandez-Lopez
Irene Del Campo
Carlos Revilla
Ana Cuevas
Fernando de la Cruz
author_sort Raul Fernandez-Lopez
title Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.
title_short Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.
title_full Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.
title_fullStr Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.
title_full_unstemmed Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.
title_sort negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.
publisher Public Library of Science (PLoS)
series PLoS Genetics
issn 1553-7390
1553-7404
publishDate 2014-02-01
description Horizontal gene transfer (HGT) is a major force driving bacterial evolution. Because of their ability to cross inter-species barriers, bacterial plasmids are essential agents for HGT. This ability, however, poses specific requisites on plasmid physiology, in particular the need to overcome a multilevel selection process with opposing demands. We analyzed the transcriptional network of plasmid R388, one of the most promiscuous plasmids in Proteobacteria. Transcriptional analysis by fluorescence expression profiling and quantitative PCR revealed a regulatory network controlled by six transcriptional repressors. The regulatory network relied on strong promoters, which were tightly repressed in negative feedback loops. Computational simulations and theoretical analysis indicated that this architecture would show a transcriptional burst after plasmid conjugation, linking the magnitude of the feedback gain with the intensity of the transcriptional burst. Experimental analysis showed that transcriptional overshooting occurred when the plasmid invaded a new population of susceptible cells. We propose that transcriptional overshooting allows genome rebooting after horizontal gene transfer, and might have an adaptive role in overcoming the opposing demands of multilevel selection.
url http://europepmc.org/articles/PMC3937220?pdf=render
work_keys_str_mv AT raulfernandezlopez negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer
AT irenedelcampo negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer
AT carlosrevilla negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer
AT anacuevas negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer
AT fernandodelacruz negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer
_version_ 1725939401852190720