Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.
Horizontal gene transfer (HGT) is a major force driving bacterial evolution. Because of their ability to cross inter-species barriers, bacterial plasmids are essential agents for HGT. This ability, however, poses specific requisites on plasmid physiology, in particular the need to overcome a multile...
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2014-02-01
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Series: | PLoS Genetics |
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doaj-95ed025edc814204822ac4242fd1e1472020-11-24T21:36:54ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042014-02-01102e100417110.1371/journal.pgen.1004171Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer.Raul Fernandez-LopezIrene Del CampoCarlos RevillaAna CuevasFernando de la CruzHorizontal gene transfer (HGT) is a major force driving bacterial evolution. Because of their ability to cross inter-species barriers, bacterial plasmids are essential agents for HGT. This ability, however, poses specific requisites on plasmid physiology, in particular the need to overcome a multilevel selection process with opposing demands. We analyzed the transcriptional network of plasmid R388, one of the most promiscuous plasmids in Proteobacteria. Transcriptional analysis by fluorescence expression profiling and quantitative PCR revealed a regulatory network controlled by six transcriptional repressors. The regulatory network relied on strong promoters, which were tightly repressed in negative feedback loops. Computational simulations and theoretical analysis indicated that this architecture would show a transcriptional burst after plasmid conjugation, linking the magnitude of the feedback gain with the intensity of the transcriptional burst. Experimental analysis showed that transcriptional overshooting occurred when the plasmid invaded a new population of susceptible cells. We propose that transcriptional overshooting allows genome rebooting after horizontal gene transfer, and might have an adaptive role in overcoming the opposing demands of multilevel selection.http://europepmc.org/articles/PMC3937220?pdf=render |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Raul Fernandez-Lopez Irene Del Campo Carlos Revilla Ana Cuevas Fernando de la Cruz |
spellingShingle |
Raul Fernandez-Lopez Irene Del Campo Carlos Revilla Ana Cuevas Fernando de la Cruz Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer. PLoS Genetics |
author_facet |
Raul Fernandez-Lopez Irene Del Campo Carlos Revilla Ana Cuevas Fernando de la Cruz |
author_sort |
Raul Fernandez-Lopez |
title |
Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer. |
title_short |
Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer. |
title_full |
Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer. |
title_fullStr |
Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer. |
title_full_unstemmed |
Negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer. |
title_sort |
negative feedback and transcriptional overshooting in a regulatory network for horizontal gene transfer. |
publisher |
Public Library of Science (PLoS) |
series |
PLoS Genetics |
issn |
1553-7390 1553-7404 |
publishDate |
2014-02-01 |
description |
Horizontal gene transfer (HGT) is a major force driving bacterial evolution. Because of their ability to cross inter-species barriers, bacterial plasmids are essential agents for HGT. This ability, however, poses specific requisites on plasmid physiology, in particular the need to overcome a multilevel selection process with opposing demands. We analyzed the transcriptional network of plasmid R388, one of the most promiscuous plasmids in Proteobacteria. Transcriptional analysis by fluorescence expression profiling and quantitative PCR revealed a regulatory network controlled by six transcriptional repressors. The regulatory network relied on strong promoters, which were tightly repressed in negative feedback loops. Computational simulations and theoretical analysis indicated that this architecture would show a transcriptional burst after plasmid conjugation, linking the magnitude of the feedback gain with the intensity of the transcriptional burst. Experimental analysis showed that transcriptional overshooting occurred when the plasmid invaded a new population of susceptible cells. We propose that transcriptional overshooting allows genome rebooting after horizontal gene transfer, and might have an adaptive role in overcoming the opposing demands of multilevel selection. |
url |
http://europepmc.org/articles/PMC3937220?pdf=render |
work_keys_str_mv |
AT raulfernandezlopez negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer AT irenedelcampo negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer AT carlosrevilla negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer AT anacuevas negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer AT fernandodelacruz negativefeedbackandtranscriptionalovershootinginaregulatorynetworkforhorizontalgenetransfer |
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1725939401852190720 |