Automatic Gleason Grading of Prostate Cancer Using Shearlet Transform and Multiple Kernel Learning

The Gleason grading system is generally used for histological grading of prostate cancer. In this paper, we first introduce using the Shearlet transform and its coefficients as texture features for automatic Gleason grading. The Shearlet transform is a mathematical tool defined based on affine syste...

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Main Authors: Hadi Rezaeilouyeh, Mohammad H. Mahoor
Format: Article
Language:English
Published: MDPI AG 2016-09-01
Series:Journal of Imaging
Subjects:
Online Access:http://www.mdpi.com/2313-433X/2/3/25
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spelling doaj-952b1f723e8d4641a0dc77fc301723352020-11-24T22:50:02ZengMDPI AGJournal of Imaging2313-433X2016-09-01232510.3390/jimaging2030025jimaging2030025Automatic Gleason Grading of Prostate Cancer Using Shearlet Transform and Multiple Kernel LearningHadi Rezaeilouyeh0Mohammad H. Mahoor1Department of Electrical and Computer Engineering, University of Denver, Denver, CO 80208, USADepartment of Electrical and Computer Engineering, University of Denver, Denver, CO 80208, USAThe Gleason grading system is generally used for histological grading of prostate cancer. In this paper, we first introduce using the Shearlet transform and its coefficients as texture features for automatic Gleason grading. The Shearlet transform is a mathematical tool defined based on affine systems and can analyze signals at various orientations and scales and detect singularities, such as image edges. These properties make the Shearlet transform more suitable for Gleason grading compared to the other transform-based feature extraction methods, such as Fourier transform, wavelet transform, etc. We also extract color channel histograms and morphological features. These features are the essential building blocks of what pathologists consider when they perform Gleason grading. Then, we use the multiple kernel learning (MKL) algorithm for fusing all three different types of extracted features. We use support vector machines (SVM) equipped with MKL for the classification of prostate slides with different Gleason grades. Using the proposed method, we achieved high classification accuracy in a dataset containing 100 prostate cancer sample images of Gleason Grades 2–5.http://www.mdpi.com/2313-433X/2/3/25Gleason gradingmultiple kernel learningprostate cancerShearlet transformtexture analysis
collection DOAJ
language English
format Article
sources DOAJ
author Hadi Rezaeilouyeh
Mohammad H. Mahoor
spellingShingle Hadi Rezaeilouyeh
Mohammad H. Mahoor
Automatic Gleason Grading of Prostate Cancer Using Shearlet Transform and Multiple Kernel Learning
Journal of Imaging
Gleason grading
multiple kernel learning
prostate cancer
Shearlet transform
texture analysis
author_facet Hadi Rezaeilouyeh
Mohammad H. Mahoor
author_sort Hadi Rezaeilouyeh
title Automatic Gleason Grading of Prostate Cancer Using Shearlet Transform and Multiple Kernel Learning
title_short Automatic Gleason Grading of Prostate Cancer Using Shearlet Transform and Multiple Kernel Learning
title_full Automatic Gleason Grading of Prostate Cancer Using Shearlet Transform and Multiple Kernel Learning
title_fullStr Automatic Gleason Grading of Prostate Cancer Using Shearlet Transform and Multiple Kernel Learning
title_full_unstemmed Automatic Gleason Grading of Prostate Cancer Using Shearlet Transform and Multiple Kernel Learning
title_sort automatic gleason grading of prostate cancer using shearlet transform and multiple kernel learning
publisher MDPI AG
series Journal of Imaging
issn 2313-433X
publishDate 2016-09-01
description The Gleason grading system is generally used for histological grading of prostate cancer. In this paper, we first introduce using the Shearlet transform and its coefficients as texture features for automatic Gleason grading. The Shearlet transform is a mathematical tool defined based on affine systems and can analyze signals at various orientations and scales and detect singularities, such as image edges. These properties make the Shearlet transform more suitable for Gleason grading compared to the other transform-based feature extraction methods, such as Fourier transform, wavelet transform, etc. We also extract color channel histograms and morphological features. These features are the essential building blocks of what pathologists consider when they perform Gleason grading. Then, we use the multiple kernel learning (MKL) algorithm for fusing all three different types of extracted features. We use support vector machines (SVM) equipped with MKL for the classification of prostate slides with different Gleason grades. Using the proposed method, we achieved high classification accuracy in a dataset containing 100 prostate cancer sample images of Gleason Grades 2–5.
topic Gleason grading
multiple kernel learning
prostate cancer
Shearlet transform
texture analysis
url http://www.mdpi.com/2313-433X/2/3/25
work_keys_str_mv AT hadirezaeilouyeh automaticgleasongradingofprostatecancerusingshearlettransformandmultiplekernellearning
AT mohammadhmahoor automaticgleasongradingofprostatecancerusingshearlettransformandmultiplekernellearning
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