Abundance and identity of red spider mite species on Brachiaria grass in Kenya and its worldwide comparative phylogeny

Brachiaria grass in Kenya offers a vigorous and nutrient rich-forage option. Invasion of introduced Brachiaria grass in Kenya by red spider mite (RSM) indicates considerable damage during the dry season. A survey on the level of mite infestation and identification on various Brachiaria grass cultiva...

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Main Authors: D.L. Mutisya, S.R. Ghimire, D.M.G. Njarui, L. Kago, D. Githae, C. Mutai
Format: Article
Language:English
Published: Science Planet Inc. 2018-04-01
Series:Canadian Journal of Biotechnology
Online Access: https://www.canadianjbiotech.com/CAN_J_BIOTECH/Archives/v2/i1/CJB-2018-118.pdf
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spelling doaj-93a929ab0b114c068689a53f48b4f0f62020-11-24T22:30:46ZengScience Planet Inc.Canadian Journal of Biotechnology2560-83042018-04-0121100107https://doi.org/10.24870/cjb.2018-000118Abundance and identity of red spider mite species on Brachiaria grass in Kenya and its worldwide comparative phylogenyD.L. Mutisya0S.R. Ghimire1D.M.G. Njarui2L. Kago3D. Githae4C. Mutai5 Kenya Agricultural and Livestock Research Organization, Katumani, KENYA Biosciences eastern and central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, KENYA Kenya Agricultural and Livestock Research Organization, Katumani, KENYA Biosciences eastern and central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, KENYA Biosciences eastern and central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, KENYA Biosciences eastern and central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, KENYA Brachiaria grass in Kenya offers a vigorous and nutrient rich-forage option. Invasion of introduced Brachiaria grass in Kenya by red spider mite (RSM) indicates considerable damage during the dry season. A survey on the level of mite infestation and identification on various Brachiaria grass cultivars was carried out in August and October in 2016 in coastal lowlands, eastern, central, and western regions of Kenya. DNA-based identification was carried out using universal primers of internal transcribed spacer (ITS2) and cytochrome oxidase I (COI) gene regions. The abundance and damage by RSM were severe in eastern and western areas of the country with cvs. Marandu and Mulato II showing the highest level of infestation. BLAST results from the NCBI database revealed the red spider mite species damaging Brachiaria grass to be Tetranychus urticae (Koch.). The countrywide sequence samples did not show a much intraspecific genetic difference on COI region from the local populations but a marked wide phylogeny difference from the similar ITS2 region. The large divergence difference (> 0.10) calls for a repeat of the work in future to ascertain species delineation. https://www.canadianjbiotech.com/CAN_J_BIOTECH/Archives/v2/i1/CJB-2018-118.pdf
collection DOAJ
language English
format Article
sources DOAJ
author D.L. Mutisya
S.R. Ghimire
D.M.G. Njarui
L. Kago
D. Githae
C. Mutai
spellingShingle D.L. Mutisya
S.R. Ghimire
D.M.G. Njarui
L. Kago
D. Githae
C. Mutai
Abundance and identity of red spider mite species on Brachiaria grass in Kenya and its worldwide comparative phylogeny
Canadian Journal of Biotechnology
author_facet D.L. Mutisya
S.R. Ghimire
D.M.G. Njarui
L. Kago
D. Githae
C. Mutai
author_sort D.L. Mutisya
title Abundance and identity of red spider mite species on Brachiaria grass in Kenya and its worldwide comparative phylogeny
title_short Abundance and identity of red spider mite species on Brachiaria grass in Kenya and its worldwide comparative phylogeny
title_full Abundance and identity of red spider mite species on Brachiaria grass in Kenya and its worldwide comparative phylogeny
title_fullStr Abundance and identity of red spider mite species on Brachiaria grass in Kenya and its worldwide comparative phylogeny
title_full_unstemmed Abundance and identity of red spider mite species on Brachiaria grass in Kenya and its worldwide comparative phylogeny
title_sort abundance and identity of red spider mite species on brachiaria grass in kenya and its worldwide comparative phylogeny
publisher Science Planet Inc.
series Canadian Journal of Biotechnology
issn 2560-8304
publishDate 2018-04-01
description Brachiaria grass in Kenya offers a vigorous and nutrient rich-forage option. Invasion of introduced Brachiaria grass in Kenya by red spider mite (RSM) indicates considerable damage during the dry season. A survey on the level of mite infestation and identification on various Brachiaria grass cultivars was carried out in August and October in 2016 in coastal lowlands, eastern, central, and western regions of Kenya. DNA-based identification was carried out using universal primers of internal transcribed spacer (ITS2) and cytochrome oxidase I (COI) gene regions. The abundance and damage by RSM were severe in eastern and western areas of the country with cvs. Marandu and Mulato II showing the highest level of infestation. BLAST results from the NCBI database revealed the red spider mite species damaging Brachiaria grass to be Tetranychus urticae (Koch.). The countrywide sequence samples did not show a much intraspecific genetic difference on COI region from the local populations but a marked wide phylogeny difference from the similar ITS2 region. The large divergence difference (> 0.10) calls for a repeat of the work in future to ascertain species delineation.
url https://www.canadianjbiotech.com/CAN_J_BIOTECH/Archives/v2/i1/CJB-2018-118.pdf
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