A model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulation

A transient, vertically resolved, analytical model for the early diagenesis of silica has been developed to quantify the importance of benthic-pelagic coupling in estuarine biogeochemical silica cycling. A sensitivity analysis based on Monte-Carlo simulations is carried out to assess the intensity a...

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Main Authors: S. Arndt, P. Regnier
Format: Article
Language:English
Published: Copernicus Publications 2007-06-01
Series:Biogeosciences
Online Access:http://www.biogeosciences.net/4/331/2007/bg-4-331-2007.pdf
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spelling doaj-934689bae02c4df8803829a6078932e32020-11-24T23:46:53ZengCopernicus PublicationsBiogeosciences1726-41701726-41892007-06-014333135210.5194/bg-4-331-2007A model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulationS. Arndt0P. Regnier1Department of Earth Sciences, University of Utrecht, Utrecht, The NetherlandsDepartment of Earth Sciences, University of Utrecht, Utrecht, The NetherlandsA transient, vertically resolved, analytical model for the early diagenesis of silica has been developed to quantify the importance of benthic-pelagic coupling in estuarine biogeochemical silica cycling. A sensitivity analysis based on Monte-Carlo simulations is carried out to assess the intensity and timing of benthic diffusive fluxes in response to a pelagic diatom bloom. The diffusive flux dynamics are analyzed over a realistic range of dissolution rate constants (max <i>k</i><sub>Si</sub> &epsilon; [6&times;10<sup>&minus;3</sup>&ndash;3.6&times;10<sup>&minus;1</sup> d<sup>&minus;1</sup>]), diffusion coefficients of dissolved silica (<i>D</i><sub>Si</sub> &epsilon; [35&times;10<sup>&minus;6</sup>&ndash;35&times;10<sup>&minus;5</sup> m<sup>2</sup> d<sup>&minus;1</sup>]) and duration of dissolved silica depletion in the water column (<i>w</i><sub>PDSI</sub> &epsilon; [1&ndash;3 month]). Results show that the diffusive silica flux responds with a time delay of 20 to 120 days to the biogenic silica deposition pulse. For high max <i>k</i><sub>Si</sub>, simulated time lags are shortest and completely determined by the dissolution kinetics. However, decreasing max <i>k</i><sub>Si</sub> leads to a slower benthic flux response. In addition, the variability increases due to the increasing importance of transport processes. The sensitivity study also allows us to constrain the uncertainties of a system-scale simulation, where a large number of benthic compartments (&gt;50 000) are coupled to a high-resolution (100&times;100 m) pelagic model of a macrotidal river and estuary (Western Scheldt, B/NL). The model is applied to a diatom bloom event recorded in 2003, characterized by pelagic silica depletion in August. Benthic processes are mainly modulated by the combined influence of local hydrodynamic conditions and pelagic primary production dynamics, and show therefore a high degree of spatial heterogeneity over short distances. Spatially integrated deposition fluxes and dissolution rates of biogenic silica are high throughout the growth period, with maxima of 1.3&times;10<sup>5</sup> mol d<sup>&minus;1</sup> (=8.0 mmol m<sup>2</sup> d<sup>&minus;1</sup>) and 7.8&times;10<sup>4</sup> mol d<sup>&minus;1</sup> (=4.8 mmol m<sup>2</sup> d<sup>&minus;1</sup>) in mid-August. The spatially integrated diffusive flux reaches a maximum of 1.5&times;10<sup>4</sup> mol d<sup>&minus;1</sup> at the end of a pelagic silica depletion period in September. However, the total amount of dissolved silica released from the estuarine sediments between June and December 2003 is small (2&times;10<sup>6</sup> mol) compared to the much higher riverine influx of dissolved silica (5.9&times;10<sup>7</sup> mol) and plays a minor role in the pelagic primary production dynamics.http://www.biogeosciences.net/4/331/2007/bg-4-331-2007.pdf
collection DOAJ
language English
format Article
sources DOAJ
author S. Arndt
P. Regnier
spellingShingle S. Arndt
P. Regnier
A model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulation
Biogeosciences
author_facet S. Arndt
P. Regnier
author_sort S. Arndt
title A model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulation
title_short A model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulation
title_full A model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulation
title_fullStr A model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulation
title_full_unstemmed A model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulation
title_sort model for the benthic-pelagic coupling of silica in estuarine ecosystems: sensitivity analysis and system scale simulation
publisher Copernicus Publications
series Biogeosciences
issn 1726-4170
1726-4189
publishDate 2007-06-01
description A transient, vertically resolved, analytical model for the early diagenesis of silica has been developed to quantify the importance of benthic-pelagic coupling in estuarine biogeochemical silica cycling. A sensitivity analysis based on Monte-Carlo simulations is carried out to assess the intensity and timing of benthic diffusive fluxes in response to a pelagic diatom bloom. The diffusive flux dynamics are analyzed over a realistic range of dissolution rate constants (max <i>k</i><sub>Si</sub> &epsilon; [6&times;10<sup>&minus;3</sup>&ndash;3.6&times;10<sup>&minus;1</sup> d<sup>&minus;1</sup>]), diffusion coefficients of dissolved silica (<i>D</i><sub>Si</sub> &epsilon; [35&times;10<sup>&minus;6</sup>&ndash;35&times;10<sup>&minus;5</sup> m<sup>2</sup> d<sup>&minus;1</sup>]) and duration of dissolved silica depletion in the water column (<i>w</i><sub>PDSI</sub> &epsilon; [1&ndash;3 month]). Results show that the diffusive silica flux responds with a time delay of 20 to 120 days to the biogenic silica deposition pulse. For high max <i>k</i><sub>Si</sub>, simulated time lags are shortest and completely determined by the dissolution kinetics. However, decreasing max <i>k</i><sub>Si</sub> leads to a slower benthic flux response. In addition, the variability increases due to the increasing importance of transport processes. The sensitivity study also allows us to constrain the uncertainties of a system-scale simulation, where a large number of benthic compartments (&gt;50 000) are coupled to a high-resolution (100&times;100 m) pelagic model of a macrotidal river and estuary (Western Scheldt, B/NL). The model is applied to a diatom bloom event recorded in 2003, characterized by pelagic silica depletion in August. Benthic processes are mainly modulated by the combined influence of local hydrodynamic conditions and pelagic primary production dynamics, and show therefore a high degree of spatial heterogeneity over short distances. Spatially integrated deposition fluxes and dissolution rates of biogenic silica are high throughout the growth period, with maxima of 1.3&times;10<sup>5</sup> mol d<sup>&minus;1</sup> (=8.0 mmol m<sup>2</sup> d<sup>&minus;1</sup>) and 7.8&times;10<sup>4</sup> mol d<sup>&minus;1</sup> (=4.8 mmol m<sup>2</sup> d<sup>&minus;1</sup>) in mid-August. The spatially integrated diffusive flux reaches a maximum of 1.5&times;10<sup>4</sup> mol d<sup>&minus;1</sup> at the end of a pelagic silica depletion period in September. However, the total amount of dissolved silica released from the estuarine sediments between June and December 2003 is small (2&times;10<sup>6</sup> mol) compared to the much higher riverine influx of dissolved silica (5.9&times;10<sup>7</sup> mol) and plays a minor role in the pelagic primary production dynamics.
url http://www.biogeosciences.net/4/331/2007/bg-4-331-2007.pdf
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