Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population
The burden of depression and anxiety in the world is rising. Identification of individuals at increased risk of developing these conditions would help to target them for prevention and ultimately reduce the healthcare burden. We developed a 10-year predictive algorithm for depression and anxiety usi...
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doaj-9302c1dd80b544629b49fd7b6c2311192021-08-13T10:06:45ZengFrontiers Media S.A.Frontiers in Psychiatry1664-06402021-08-011210.3389/fpsyt.2021.689026689026Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General PopulationDavide Morelli0Davide Morelli1Nikola Dolezalova2Sonia Ponzo3Michele Colombo4David Plans5David Plans6David Plans7Huma Therapeutics Ltd., London, United KingdomDepartment of Engineering Science, Institute of Biomedical Engineering, University of Oxford, Oxford, United KingdomHuma Therapeutics Ltd., London, United KingdomHuma Therapeutics Ltd., London, United KingdomHuma Therapeutics Ltd., London, United KingdomHuma Therapeutics Ltd., London, United KingdomDepartment of Experimental Psychology, University of Oxford, Oxford, United KingdomInitiative in the Digital Economy at Exeter (INDEX) Group, Department of Science, Innovation, Technology, and Entrepreneurship, University of Exeter, Exeter, United KingdomThe burden of depression and anxiety in the world is rising. Identification of individuals at increased risk of developing these conditions would help to target them for prevention and ultimately reduce the healthcare burden. We developed a 10-year predictive algorithm for depression and anxiety using the full cohort of over 400,000 UK Biobank (UKB) participants without pre-existing depression or anxiety using digitally obtainable information. From the initial 167 variables selected from UKB, processed into 429 features, iterative backward elimination using Cox proportional hazards model was performed to select predictors which account for the majority of its predictive capability. Baseline and reduced models were then trained for depression and anxiety using both Cox and DeepSurv, a deep neural network approach to survival analysis. The baseline Cox model achieved concordance of 0.7772 and 0.7720 on the validation dataset for depression and anxiety, respectively. For the DeepSurv model, respective concordance indices were 0.7810 and 0.7728. After feature selection, the depression model contained 39 predictors and the concordance index was 0.7769 for Cox and 0.7772 for DeepSurv. The reduced anxiety model, with 53 predictors, achieved concordance of 0.7699 for Cox and 0.7710 for DeepSurv. The final models showed good discrimination and calibration in the test datasets. We developed predictive risk scores with high discrimination for depression and anxiety using the UKB cohort, incorporating predictors which are easily obtainable via smartphone. If deployed in a digital solution, it would allow individuals to track their risk, as well as provide some pointers to how to decrease it through lifestyle changes.https://www.frontiersin.org/articles/10.3389/fpsyt.2021.689026/fulldepressionmachine learninganxietyprediction modelrisk scores |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Davide Morelli Davide Morelli Nikola Dolezalova Sonia Ponzo Michele Colombo David Plans David Plans David Plans |
spellingShingle |
Davide Morelli Davide Morelli Nikola Dolezalova Sonia Ponzo Michele Colombo David Plans David Plans David Plans Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population Frontiers in Psychiatry depression machine learning anxiety prediction model risk scores |
author_facet |
Davide Morelli Davide Morelli Nikola Dolezalova Sonia Ponzo Michele Colombo David Plans David Plans David Plans |
author_sort |
Davide Morelli |
title |
Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population |
title_short |
Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population |
title_full |
Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population |
title_fullStr |
Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population |
title_full_unstemmed |
Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population |
title_sort |
development of digitally obtainable 10-year risk scores for depression and anxiety in the general population |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Psychiatry |
issn |
1664-0640 |
publishDate |
2021-08-01 |
description |
The burden of depression and anxiety in the world is rising. Identification of individuals at increased risk of developing these conditions would help to target them for prevention and ultimately reduce the healthcare burden. We developed a 10-year predictive algorithm for depression and anxiety using the full cohort of over 400,000 UK Biobank (UKB) participants without pre-existing depression or anxiety using digitally obtainable information. From the initial 167 variables selected from UKB, processed into 429 features, iterative backward elimination using Cox proportional hazards model was performed to select predictors which account for the majority of its predictive capability. Baseline and reduced models were then trained for depression and anxiety using both Cox and DeepSurv, a deep neural network approach to survival analysis. The baseline Cox model achieved concordance of 0.7772 and 0.7720 on the validation dataset for depression and anxiety, respectively. For the DeepSurv model, respective concordance indices were 0.7810 and 0.7728. After feature selection, the depression model contained 39 predictors and the concordance index was 0.7769 for Cox and 0.7772 for DeepSurv. The reduced anxiety model, with 53 predictors, achieved concordance of 0.7699 for Cox and 0.7710 for DeepSurv. The final models showed good discrimination and calibration in the test datasets. We developed predictive risk scores with high discrimination for depression and anxiety using the UKB cohort, incorporating predictors which are easily obtainable via smartphone. If deployed in a digital solution, it would allow individuals to track their risk, as well as provide some pointers to how to decrease it through lifestyle changes. |
topic |
depression machine learning anxiety prediction model risk scores |
url |
https://www.frontiersin.org/articles/10.3389/fpsyt.2021.689026/full |
work_keys_str_mv |
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