Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population

The burden of depression and anxiety in the world is rising. Identification of individuals at increased risk of developing these conditions would help to target them for prevention and ultimately reduce the healthcare burden. We developed a 10-year predictive algorithm for depression and anxiety usi...

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Main Authors: Davide Morelli, Nikola Dolezalova, Sonia Ponzo, Michele Colombo, David Plans
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-08-01
Series:Frontiers in Psychiatry
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fpsyt.2021.689026/full
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spelling doaj-9302c1dd80b544629b49fd7b6c2311192021-08-13T10:06:45ZengFrontiers Media S.A.Frontiers in Psychiatry1664-06402021-08-011210.3389/fpsyt.2021.689026689026Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General PopulationDavide Morelli0Davide Morelli1Nikola Dolezalova2Sonia Ponzo3Michele Colombo4David Plans5David Plans6David Plans7Huma Therapeutics Ltd., London, United KingdomDepartment of Engineering Science, Institute of Biomedical Engineering, University of Oxford, Oxford, United KingdomHuma Therapeutics Ltd., London, United KingdomHuma Therapeutics Ltd., London, United KingdomHuma Therapeutics Ltd., London, United KingdomHuma Therapeutics Ltd., London, United KingdomDepartment of Experimental Psychology, University of Oxford, Oxford, United KingdomInitiative in the Digital Economy at Exeter (INDEX) Group, Department of Science, Innovation, Technology, and Entrepreneurship, University of Exeter, Exeter, United KingdomThe burden of depression and anxiety in the world is rising. Identification of individuals at increased risk of developing these conditions would help to target them for prevention and ultimately reduce the healthcare burden. We developed a 10-year predictive algorithm for depression and anxiety using the full cohort of over 400,000 UK Biobank (UKB) participants without pre-existing depression or anxiety using digitally obtainable information. From the initial 167 variables selected from UKB, processed into 429 features, iterative backward elimination using Cox proportional hazards model was performed to select predictors which account for the majority of its predictive capability. Baseline and reduced models were then trained for depression and anxiety using both Cox and DeepSurv, a deep neural network approach to survival analysis. The baseline Cox model achieved concordance of 0.7772 and 0.7720 on the validation dataset for depression and anxiety, respectively. For the DeepSurv model, respective concordance indices were 0.7810 and 0.7728. After feature selection, the depression model contained 39 predictors and the concordance index was 0.7769 for Cox and 0.7772 for DeepSurv. The reduced anxiety model, with 53 predictors, achieved concordance of 0.7699 for Cox and 0.7710 for DeepSurv. The final models showed good discrimination and calibration in the test datasets. We developed predictive risk scores with high discrimination for depression and anxiety using the UKB cohort, incorporating predictors which are easily obtainable via smartphone. If deployed in a digital solution, it would allow individuals to track their risk, as well as provide some pointers to how to decrease it through lifestyle changes.https://www.frontiersin.org/articles/10.3389/fpsyt.2021.689026/fulldepressionmachine learninganxietyprediction modelrisk scores
collection DOAJ
language English
format Article
sources DOAJ
author Davide Morelli
Davide Morelli
Nikola Dolezalova
Sonia Ponzo
Michele Colombo
David Plans
David Plans
David Plans
spellingShingle Davide Morelli
Davide Morelli
Nikola Dolezalova
Sonia Ponzo
Michele Colombo
David Plans
David Plans
David Plans
Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population
Frontiers in Psychiatry
depression
machine learning
anxiety
prediction model
risk scores
author_facet Davide Morelli
Davide Morelli
Nikola Dolezalova
Sonia Ponzo
Michele Colombo
David Plans
David Plans
David Plans
author_sort Davide Morelli
title Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population
title_short Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population
title_full Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population
title_fullStr Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population
title_full_unstemmed Development of Digitally Obtainable 10-Year Risk Scores for Depression and Anxiety in the General Population
title_sort development of digitally obtainable 10-year risk scores for depression and anxiety in the general population
publisher Frontiers Media S.A.
series Frontiers in Psychiatry
issn 1664-0640
publishDate 2021-08-01
description The burden of depression and anxiety in the world is rising. Identification of individuals at increased risk of developing these conditions would help to target them for prevention and ultimately reduce the healthcare burden. We developed a 10-year predictive algorithm for depression and anxiety using the full cohort of over 400,000 UK Biobank (UKB) participants without pre-existing depression or anxiety using digitally obtainable information. From the initial 167 variables selected from UKB, processed into 429 features, iterative backward elimination using Cox proportional hazards model was performed to select predictors which account for the majority of its predictive capability. Baseline and reduced models were then trained for depression and anxiety using both Cox and DeepSurv, a deep neural network approach to survival analysis. The baseline Cox model achieved concordance of 0.7772 and 0.7720 on the validation dataset for depression and anxiety, respectively. For the DeepSurv model, respective concordance indices were 0.7810 and 0.7728. After feature selection, the depression model contained 39 predictors and the concordance index was 0.7769 for Cox and 0.7772 for DeepSurv. The reduced anxiety model, with 53 predictors, achieved concordance of 0.7699 for Cox and 0.7710 for DeepSurv. The final models showed good discrimination and calibration in the test datasets. We developed predictive risk scores with high discrimination for depression and anxiety using the UKB cohort, incorporating predictors which are easily obtainable via smartphone. If deployed in a digital solution, it would allow individuals to track their risk, as well as provide some pointers to how to decrease it through lifestyle changes.
topic depression
machine learning
anxiety
prediction model
risk scores
url https://www.frontiersin.org/articles/10.3389/fpsyt.2021.689026/full
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