Systematic Analysis of the Association between Gut Flora and Obesity through High-Throughput Sequencing and Bioinformatics Approaches
Eighty-one stool samples from Taiwanese were collected for analysis of the association between the gut flora and obesity. The supervised analysis showed that the most, abundant genera of bacteria in normal samples (from people with a body mass index (BMI) ≤ 24) were Bacteroides (27.7%), Prevotella (...
Main Authors: | , , , , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Hindawi Limited
2014-01-01
|
Series: | BioMed Research International |
Online Access: | http://dx.doi.org/10.1155/2014/906168 |
id |
doaj-92635d374af34ab382d799bb7e03284e |
---|---|
record_format |
Article |
spelling |
doaj-92635d374af34ab382d799bb7e03284e2020-11-24T23:47:14ZengHindawi LimitedBioMed Research International2314-61332314-61412014-01-01201410.1155/2014/906168906168Systematic Analysis of the Association between Gut Flora and Obesity through High-Throughput Sequencing and Bioinformatics ApproachesChih-Min Chiu0Wei-Chih Huang1Shun-Long Weng2Han-Chi Tseng3Chao Liang4Wei-Chi Wang5Ting Yang6Tzu-Ling Yang7Chen-Tsung Weng8Tzu-Hao Chang9Hsien-Da Huang10Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, TaiwanInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, TaiwanInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, TaiwanTseng Han-Chi General Hospital, Nantou 542, TaiwanHealth GeneTech Corporation, Taoyuan 330, TaiwanHealth GeneTech Corporation, Taoyuan 330, TaiwanInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, TaiwanInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, TaiwanHealth GeneTech Corporation, Taoyuan 330, TaiwanGraduate Institute of Biomedical Informatics, Taipei Medical University, Taipei 110, TaiwanInstitute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, TaiwanEighty-one stool samples from Taiwanese were collected for analysis of the association between the gut flora and obesity. The supervised analysis showed that the most, abundant genera of bacteria in normal samples (from people with a body mass index (BMI) ≤ 24) were Bacteroides (27.7%), Prevotella (19.4%), Escherichia (12%), Phascolarctobacterium (3.9%), and Eubacterium (3.5%). The most abundant genera of bacteria in case samples (with a BMI ≥ 27) were Bacteroides (29%), Prevotella (21%), Escherichia (7.4%), Megamonas (5.1%), and Phascolarctobacterium (3.8%). A principal coordinate analysis (PCoA) demonstrated that normal samples were clustered more compactly than case samples. An unsupervised analysis demonstrated that bacterial communities in the gut were clustered into two main groups: N-like and OB-like groups. Remarkably, most normal samples (78%) were clustered in the N-like group, and most case samples (81%) were clustered in the OB-like group (Fisher’s P value=1.61E-07). The results showed that bacterial communities in the gut were highly associated with obesity. This is the first study in Taiwan to investigate the association between human gut flora and obesity, and the results provide new insights into the correlation of bacteria with the rising trend in obesity.http://dx.doi.org/10.1155/2014/906168 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Chih-Min Chiu Wei-Chih Huang Shun-Long Weng Han-Chi Tseng Chao Liang Wei-Chi Wang Ting Yang Tzu-Ling Yang Chen-Tsung Weng Tzu-Hao Chang Hsien-Da Huang |
spellingShingle |
Chih-Min Chiu Wei-Chih Huang Shun-Long Weng Han-Chi Tseng Chao Liang Wei-Chi Wang Ting Yang Tzu-Ling Yang Chen-Tsung Weng Tzu-Hao Chang Hsien-Da Huang Systematic Analysis of the Association between Gut Flora and Obesity through High-Throughput Sequencing and Bioinformatics Approaches BioMed Research International |
author_facet |
Chih-Min Chiu Wei-Chih Huang Shun-Long Weng Han-Chi Tseng Chao Liang Wei-Chi Wang Ting Yang Tzu-Ling Yang Chen-Tsung Weng Tzu-Hao Chang Hsien-Da Huang |
author_sort |
Chih-Min Chiu |
title |
Systematic Analysis of the Association between Gut Flora and Obesity through High-Throughput Sequencing and Bioinformatics Approaches |
title_short |
Systematic Analysis of the Association between Gut Flora and Obesity through High-Throughput Sequencing and Bioinformatics Approaches |
title_full |
Systematic Analysis of the Association between Gut Flora and Obesity through High-Throughput Sequencing and Bioinformatics Approaches |
title_fullStr |
Systematic Analysis of the Association between Gut Flora and Obesity through High-Throughput Sequencing and Bioinformatics Approaches |
title_full_unstemmed |
Systematic Analysis of the Association between Gut Flora and Obesity through High-Throughput Sequencing and Bioinformatics Approaches |
title_sort |
systematic analysis of the association between gut flora and obesity through high-throughput sequencing and bioinformatics approaches |
publisher |
Hindawi Limited |
series |
BioMed Research International |
issn |
2314-6133 2314-6141 |
publishDate |
2014-01-01 |
description |
Eighty-one stool samples from Taiwanese were collected for analysis of the association between the gut flora and obesity. The supervised analysis showed that the most, abundant genera of bacteria in normal samples (from people with a body mass index (BMI) ≤ 24) were Bacteroides (27.7%), Prevotella (19.4%), Escherichia (12%), Phascolarctobacterium (3.9%), and Eubacterium (3.5%). The most abundant genera of bacteria in case samples (with a BMI ≥ 27) were Bacteroides (29%), Prevotella (21%), Escherichia (7.4%), Megamonas (5.1%), and Phascolarctobacterium (3.8%). A principal coordinate analysis (PCoA) demonstrated that normal samples were clustered more compactly than case samples. An unsupervised analysis demonstrated that bacterial communities in the gut were clustered into two main groups: N-like and OB-like groups. Remarkably, most normal samples (78%) were clustered in the N-like group, and most case samples (81%) were clustered in the OB-like group (Fisher’s P value=1.61E-07). The results showed that bacterial communities in the gut were highly associated with obesity. This is the first study in Taiwan to investigate the association between human gut flora and obesity, and the results provide new insights into the correlation of bacteria with the rising trend in obesity. |
url |
http://dx.doi.org/10.1155/2014/906168 |
work_keys_str_mv |
AT chihminchiu systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT weichihhuang systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT shunlongweng systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT hanchitseng systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT chaoliang systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT weichiwang systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT tingyang systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT tzulingyang systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT chentsungweng systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT tzuhaochang systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches AT hsiendahuang systematicanalysisoftheassociationbetweengutfloraandobesitythroughhighthroughputsequencingandbioinformaticsapproaches |
_version_ |
1725490864704192512 |