Comparative Transcriptome Identifies Gene Expression Networks Regulating Developmental Pollen Abortion in Ogura Cytoplasmic Male Sterility in Chinese Cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>)

Ogura cytoplasmic male sterility (Ogura CMS), originally identified in wild radish (<i>Raphanus sativus</i>), has enabled complete pollen sterility in <i>Brassica</i> plants, but the underlying mechanism in Ogura CMS Chinese cabbage (<i>Brassica rapa</i> ssp. <...

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Main Authors: Lijiao Hu, Xiaowei Zhang, Yuxiang Yuan, Zhiyong Wang, Shuangjuan Yang, Ruina Li, Ujjal Kumar Nath, Yanyan Zhao, Baoming Tian, Gongyao Shi, Zhengqing Xie, Fang Wei, Xiaochun Wei
Format: Article
Language:English
Published: MDPI AG 2021-06-01
Series:Horticulturae
Subjects:
Online Access:https://www.mdpi.com/2311-7524/7/6/157
id doaj-925c31643cbb4ea5b1755e3d84d80778
record_format Article
collection DOAJ
language English
format Article
sources DOAJ
author Lijiao Hu
Xiaowei Zhang
Yuxiang Yuan
Zhiyong Wang
Shuangjuan Yang
Ruina Li
Ujjal Kumar Nath
Yanyan Zhao
Baoming Tian
Gongyao Shi
Zhengqing Xie
Fang Wei
Xiaochun Wei
spellingShingle Lijiao Hu
Xiaowei Zhang
Yuxiang Yuan
Zhiyong Wang
Shuangjuan Yang
Ruina Li
Ujjal Kumar Nath
Yanyan Zhao
Baoming Tian
Gongyao Shi
Zhengqing Xie
Fang Wei
Xiaochun Wei
Comparative Transcriptome Identifies Gene Expression Networks Regulating Developmental Pollen Abortion in Ogura Cytoplasmic Male Sterility in Chinese Cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>)
Horticulturae
Ogura cytoplasmic male sterility
pollen abortion
transcriptome
phenylpropane synthesis
Chinese cabbage
author_facet Lijiao Hu
Xiaowei Zhang
Yuxiang Yuan
Zhiyong Wang
Shuangjuan Yang
Ruina Li
Ujjal Kumar Nath
Yanyan Zhao
Baoming Tian
Gongyao Shi
Zhengqing Xie
Fang Wei
Xiaochun Wei
author_sort Lijiao Hu
title Comparative Transcriptome Identifies Gene Expression Networks Regulating Developmental Pollen Abortion in Ogura Cytoplasmic Male Sterility in Chinese Cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>)
title_short Comparative Transcriptome Identifies Gene Expression Networks Regulating Developmental Pollen Abortion in Ogura Cytoplasmic Male Sterility in Chinese Cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>)
title_full Comparative Transcriptome Identifies Gene Expression Networks Regulating Developmental Pollen Abortion in Ogura Cytoplasmic Male Sterility in Chinese Cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>)
title_fullStr Comparative Transcriptome Identifies Gene Expression Networks Regulating Developmental Pollen Abortion in Ogura Cytoplasmic Male Sterility in Chinese Cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>)
title_full_unstemmed Comparative Transcriptome Identifies Gene Expression Networks Regulating Developmental Pollen Abortion in Ogura Cytoplasmic Male Sterility in Chinese Cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>)
title_sort comparative transcriptome identifies gene expression networks regulating developmental pollen abortion in ogura cytoplasmic male sterility in chinese cabbage (<i>brassica rapa</i> ssp. <i>pekinensis</i>)
publisher MDPI AG
series Horticulturae
issn 2311-7524
publishDate 2021-06-01
description Ogura cytoplasmic male sterility (Ogura CMS), originally identified in wild radish (<i>Raphanus sativus</i>), has enabled complete pollen sterility in <i>Brassica</i> plants, but the underlying mechanism in Ogura CMS Chinese cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>) remains unclear. In this study cytological analysis showed that during microsporogenesis the meiosis occurred normally, and the uninucleated pollens subsequently formed, but the development of both binucleated and trinucleated pollens was obviously disrupted due to defects of pollen mitosis in the Ogura CMS line (Tyms) compared with the corresponding maintainer line (231–330). In transcriptome profiling a total of 8052 differentially expressed genes (DEGs) were identified, among which 3890 were up-regulated and 4162 were down-regulated at the pollen abortion stages in an Ogura CMS line. KOG cluster analysis demonstrated that a large number of DEGs were related to the cytoskeleton’s dynamics, which may account for the failure of pollen mitosis during development in the Ogura CMS line. The pivotal genes related to the phenylpropane synthesis pathway (<i>PAL</i>, <i>4CL</i> and <i>CAD</i>) were significantly down-regulated, which probably affected the formation and disposition of anther lignin and sporopollenin, and eventually led to abnormality in the pollen exine structure. In addition, several key up-regulated genes (<i>GPX7</i>, <i>G6PD</i> and <i>PGD1</i>) related to the glutathione oxidation-reduction (REDOX) reaction indicated that the accumulation of peroxides in Ogura CMS lines during this period affected the pollen development. Taken together, this cytological and molecular evidence is expected to advance our understanding of pollen abortion induced by Ogura cytoplasmic action in Chinese cabbage.
topic Ogura cytoplasmic male sterility
pollen abortion
transcriptome
phenylpropane synthesis
Chinese cabbage
url https://www.mdpi.com/2311-7524/7/6/157
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spelling doaj-925c31643cbb4ea5b1755e3d84d807782021-07-01T00:42:15ZengMDPI AGHorticulturae2311-75242021-06-01715715710.3390/horticulturae7060157Comparative Transcriptome Identifies Gene Expression Networks Regulating Developmental Pollen Abortion in Ogura Cytoplasmic Male Sterility in Chinese Cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>)Lijiao Hu0Xiaowei Zhang1Yuxiang Yuan2Zhiyong Wang3Shuangjuan Yang4Ruina Li5Ujjal Kumar Nath6Yanyan Zhao7Baoming Tian8Gongyao Shi9Zhengqing Xie10Fang Wei11Xiaochun Wei12Institute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, ChinaInstitute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, ChinaInstitute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, ChinaInstitute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, ChinaInstitute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, ChinaHenan International Joint Laboratory of Crop Gene Resources and Improvement, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, ChinaDepartment of Genetics and Plant Breeding, Bangladesh Agricultural University, Mymensingh 2202, BangladeshInstitute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, ChinaHenan International Joint Laboratory of Crop Gene Resources and Improvement, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, ChinaHenan International Joint Laboratory of Crop Gene Resources and Improvement, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, ChinaHenan International Joint Laboratory of Crop Gene Resources and Improvement, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, ChinaInstitute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, ChinaInstitute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, ChinaOgura cytoplasmic male sterility (Ogura CMS), originally identified in wild radish (<i>Raphanus sativus</i>), has enabled complete pollen sterility in <i>Brassica</i> plants, but the underlying mechanism in Ogura CMS Chinese cabbage (<i>Brassica rapa</i> ssp. <i>pekinensis</i>) remains unclear. In this study cytological analysis showed that during microsporogenesis the meiosis occurred normally, and the uninucleated pollens subsequently formed, but the development of both binucleated and trinucleated pollens was obviously disrupted due to defects of pollen mitosis in the Ogura CMS line (Tyms) compared with the corresponding maintainer line (231–330). In transcriptome profiling a total of 8052 differentially expressed genes (DEGs) were identified, among which 3890 were up-regulated and 4162 were down-regulated at the pollen abortion stages in an Ogura CMS line. KOG cluster analysis demonstrated that a large number of DEGs were related to the cytoskeleton’s dynamics, which may account for the failure of pollen mitosis during development in the Ogura CMS line. The pivotal genes related to the phenylpropane synthesis pathway (<i>PAL</i>, <i>4CL</i> and <i>CAD</i>) were significantly down-regulated, which probably affected the formation and disposition of anther lignin and sporopollenin, and eventually led to abnormality in the pollen exine structure. In addition, several key up-regulated genes (<i>GPX7</i>, <i>G6PD</i> and <i>PGD1</i>) related to the glutathione oxidation-reduction (REDOX) reaction indicated that the accumulation of peroxides in Ogura CMS lines during this period affected the pollen development. Taken together, this cytological and molecular evidence is expected to advance our understanding of pollen abortion induced by Ogura cytoplasmic action in Chinese cabbage.https://www.mdpi.com/2311-7524/7/6/157Ogura cytoplasmic male sterilitypollen abortiontranscriptomephenylpropane synthesisChinese cabbage