Surviving Starvation: Proteomic and Lipidomic Profiling of Nutrient Deprivation in the Smallest Known Free-Living Eukaryote

Marine phytoplankton, comprising cyanobacteria, micro- and pico-algae are key to photosynthesis, oxygen production and carbon assimilation on Earth. The unicellular green picoalga <i>Ostreococcus tauri</i> holds a key position at the base of the green lineage of plants, which makes it an...

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Main Authors: Sarah F. Martin, Mary K. Doherty, Eliane Salvo-Chirnside, Seshu R. Tammireddy, Jiaxiuyu Liu, Thierry Le Bihan, Phillip D. Whitfield
Format: Article
Language:English
Published: MDPI AG 2020-07-01
Series:Metabolites
Subjects:
Online Access:https://www.mdpi.com/2218-1989/10/7/273
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spelling doaj-91809e41638a4936a64e7ca5edd694c92020-11-25T03:24:22ZengMDPI AGMetabolites2218-19892020-07-011027327310.3390/metabo10070273Surviving Starvation: Proteomic and Lipidomic Profiling of Nutrient Deprivation in the Smallest Known Free-Living EukaryoteSarah F. Martin0Mary K. Doherty1Eliane Salvo-Chirnside2Seshu R. Tammireddy3Jiaxiuyu Liu4Thierry Le Bihan5Phillip D. Whitfield6Kinetic Parameter Facility, SynthSys—Synthetic and Systems Biology, The University of Edinburgh, Edinburgh EH9 3BD, UKLipidomics Research Facility, University of the Highlands and Islands, Inverness IV2 3JH, UKKinetic Parameter Facility, SynthSys—Synthetic and Systems Biology, The University of Edinburgh, Edinburgh EH9 3BD, UKLipidomics Research Facility, University of the Highlands and Islands, Inverness IV2 3JH, UKKinetic Parameter Facility, SynthSys—Synthetic and Systems Biology, The University of Edinburgh, Edinburgh EH9 3BD, UKKinetic Parameter Facility, SynthSys—Synthetic and Systems Biology, The University of Edinburgh, Edinburgh EH9 3BD, UKLipidomics Research Facility, University of the Highlands and Islands, Inverness IV2 3JH, UKMarine phytoplankton, comprising cyanobacteria, micro- and pico-algae are key to photosynthesis, oxygen production and carbon assimilation on Earth. The unicellular green picoalga <i>Ostreococcus tauri</i> holds a key position at the base of the green lineage of plants, which makes it an interesting model organism. <i>O. tauri</i> has adapted to survive in low levels of nitrogen and phosphorus in the open ocean and also during rapid changes in the levels of these nutrients in coastal waters. In this study, we have employed untargeted proteomic and lipidomic strategies to investigate the molecular responses of <i>O. tauri</i> to low-nitrogen and low-phosphorus environments. In the absence of external nitrogen, there was an elevation in the expression of ammonia and urea transporter proteins together with an accumulation of triglycerides. In phosphate-limiting conditions, the expression levels of phosphokinases and phosphate transporters were increased, indicating an attempt to maximise scavenging opportunities as opposed to energy conservation conditions. The production of betaine lipids was also elevated, highlighting a shift away from phospholipid metabolism. This finding was supported by the putative identification of betaine synthase in <i>O. tauri</i>. This work offers additional perspectives on the complex strategies that underpin the adaptive processes of the smallest known free-living eukaryote to alterations in environmental conditions.https://www.mdpi.com/2218-1989/10/7/273algaelipid metabolismnitrogen<i>Ostreococcus tauri</i>phosphorusproteome
collection DOAJ
language English
format Article
sources DOAJ
author Sarah F. Martin
Mary K. Doherty
Eliane Salvo-Chirnside
Seshu R. Tammireddy
Jiaxiuyu Liu
Thierry Le Bihan
Phillip D. Whitfield
spellingShingle Sarah F. Martin
Mary K. Doherty
Eliane Salvo-Chirnside
Seshu R. Tammireddy
Jiaxiuyu Liu
Thierry Le Bihan
Phillip D. Whitfield
Surviving Starvation: Proteomic and Lipidomic Profiling of Nutrient Deprivation in the Smallest Known Free-Living Eukaryote
Metabolites
algae
lipid metabolism
nitrogen
<i>Ostreococcus tauri</i>
phosphorus
proteome
author_facet Sarah F. Martin
Mary K. Doherty
Eliane Salvo-Chirnside
Seshu R. Tammireddy
Jiaxiuyu Liu
Thierry Le Bihan
Phillip D. Whitfield
author_sort Sarah F. Martin
title Surviving Starvation: Proteomic and Lipidomic Profiling of Nutrient Deprivation in the Smallest Known Free-Living Eukaryote
title_short Surviving Starvation: Proteomic and Lipidomic Profiling of Nutrient Deprivation in the Smallest Known Free-Living Eukaryote
title_full Surviving Starvation: Proteomic and Lipidomic Profiling of Nutrient Deprivation in the Smallest Known Free-Living Eukaryote
title_fullStr Surviving Starvation: Proteomic and Lipidomic Profiling of Nutrient Deprivation in the Smallest Known Free-Living Eukaryote
title_full_unstemmed Surviving Starvation: Proteomic and Lipidomic Profiling of Nutrient Deprivation in the Smallest Known Free-Living Eukaryote
title_sort surviving starvation: proteomic and lipidomic profiling of nutrient deprivation in the smallest known free-living eukaryote
publisher MDPI AG
series Metabolites
issn 2218-1989
publishDate 2020-07-01
description Marine phytoplankton, comprising cyanobacteria, micro- and pico-algae are key to photosynthesis, oxygen production and carbon assimilation on Earth. The unicellular green picoalga <i>Ostreococcus tauri</i> holds a key position at the base of the green lineage of plants, which makes it an interesting model organism. <i>O. tauri</i> has adapted to survive in low levels of nitrogen and phosphorus in the open ocean and also during rapid changes in the levels of these nutrients in coastal waters. In this study, we have employed untargeted proteomic and lipidomic strategies to investigate the molecular responses of <i>O. tauri</i> to low-nitrogen and low-phosphorus environments. In the absence of external nitrogen, there was an elevation in the expression of ammonia and urea transporter proteins together with an accumulation of triglycerides. In phosphate-limiting conditions, the expression levels of phosphokinases and phosphate transporters were increased, indicating an attempt to maximise scavenging opportunities as opposed to energy conservation conditions. The production of betaine lipids was also elevated, highlighting a shift away from phospholipid metabolism. This finding was supported by the putative identification of betaine synthase in <i>O. tauri</i>. This work offers additional perspectives on the complex strategies that underpin the adaptive processes of the smallest known free-living eukaryote to alterations in environmental conditions.
topic algae
lipid metabolism
nitrogen
<i>Ostreococcus tauri</i>
phosphorus
proteome
url https://www.mdpi.com/2218-1989/10/7/273
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