Stable Soil Microbial Functional Structure Responding to Biodiversity Loss Based on Metagenomic Evidences

Anthropogenic disturbances and global climate change are causing large-scale biodiversity loss and threatening ecosystem functions. However, due to the lack of knowledge on microbial species loss, our understanding on how functional profiles of soil microbes respond to diversity decline is still lim...

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Main Authors: Huaihai Chen, Kayan Ma, Yu Huang, Zhiyuan Yao, Chengjin Chu
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-10-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2021.716764/full
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spelling doaj-90d93ed2c3954e5490b9e68eda2cb9052021-10-07T06:46:40ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2021-10-011210.3389/fmicb.2021.716764716764Stable Soil Microbial Functional Structure Responding to Biodiversity Loss Based on Metagenomic EvidencesHuaihai Chen0Kayan Ma1Yu Huang2Zhiyuan Yao3Chengjin Chu4State Key Laboratory of Biocontrol, School of Ecology, Sun Yat-sen University, Shenzhen, ChinaState Key Laboratory of Biocontrol, School of Ecology, Sun Yat-sen University, Shenzhen, ChinaState Key Laboratory of Biocontrol, School of Ecology, Sun Yat-sen University, Shenzhen, ChinaSchool of Civil and Environmental Engineering, Ningbo University, Ningbo, ChinaState Key Laboratory of Biocontrol, School of Life Sciences and School of Ecology, Sun Yat-sen University, Guangzhou, ChinaAnthropogenic disturbances and global climate change are causing large-scale biodiversity loss and threatening ecosystem functions. However, due to the lack of knowledge on microbial species loss, our understanding on how functional profiles of soil microbes respond to diversity decline is still limited. Here, we evaluated the biotic homogenization of global soil metagenomic data to examine whether microbial functional structure is resilient to significant diversity reduction. Our results showed that although biodiversity loss caused a decrease in taxonomic species by 72%, the changes in the relative abundance of diverse functional categories were limited. The stability of functional structures associated with microbial species richness decline in terrestrial systems suggests a decoupling of taxonomy and function. The changes in functional profile with biodiversity loss were function-specific, with broad-scale metabolism functions decreasing and typical nutrient-cycling functions increasing. Our results imply high levels of microbial physiological versatility in the face of significant biodiversity decline, which, however, does not necessarily mean that a loss in total functional abundance, such as microbial activity, can be overlooked in the background of unprecedented species extinction.https://www.frontiersin.org/articles/10.3389/fmicb.2021.716764/fullbiodiversity lossecosystem functionmetabolismnutrient-cyclingfunctional stability
collection DOAJ
language English
format Article
sources DOAJ
author Huaihai Chen
Kayan Ma
Yu Huang
Zhiyuan Yao
Chengjin Chu
spellingShingle Huaihai Chen
Kayan Ma
Yu Huang
Zhiyuan Yao
Chengjin Chu
Stable Soil Microbial Functional Structure Responding to Biodiversity Loss Based on Metagenomic Evidences
Frontiers in Microbiology
biodiversity loss
ecosystem function
metabolism
nutrient-cycling
functional stability
author_facet Huaihai Chen
Kayan Ma
Yu Huang
Zhiyuan Yao
Chengjin Chu
author_sort Huaihai Chen
title Stable Soil Microbial Functional Structure Responding to Biodiversity Loss Based on Metagenomic Evidences
title_short Stable Soil Microbial Functional Structure Responding to Biodiversity Loss Based on Metagenomic Evidences
title_full Stable Soil Microbial Functional Structure Responding to Biodiversity Loss Based on Metagenomic Evidences
title_fullStr Stable Soil Microbial Functional Structure Responding to Biodiversity Loss Based on Metagenomic Evidences
title_full_unstemmed Stable Soil Microbial Functional Structure Responding to Biodiversity Loss Based on Metagenomic Evidences
title_sort stable soil microbial functional structure responding to biodiversity loss based on metagenomic evidences
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2021-10-01
description Anthropogenic disturbances and global climate change are causing large-scale biodiversity loss and threatening ecosystem functions. However, due to the lack of knowledge on microbial species loss, our understanding on how functional profiles of soil microbes respond to diversity decline is still limited. Here, we evaluated the biotic homogenization of global soil metagenomic data to examine whether microbial functional structure is resilient to significant diversity reduction. Our results showed that although biodiversity loss caused a decrease in taxonomic species by 72%, the changes in the relative abundance of diverse functional categories were limited. The stability of functional structures associated with microbial species richness decline in terrestrial systems suggests a decoupling of taxonomy and function. The changes in functional profile with biodiversity loss were function-specific, with broad-scale metabolism functions decreasing and typical nutrient-cycling functions increasing. Our results imply high levels of microbial physiological versatility in the face of significant biodiversity decline, which, however, does not necessarily mean that a loss in total functional abundance, such as microbial activity, can be overlooked in the background of unprecedented species extinction.
topic biodiversity loss
ecosystem function
metabolism
nutrient-cycling
functional stability
url https://www.frontiersin.org/articles/10.3389/fmicb.2021.716764/full
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