An Insight into the Microbial Community Structure of White Rann of Kachchh: A Study towards Functional Aspects and Taxonomic Profiling

The desert environment owns a distinctive set of microbial communities as compared to other environment across the globe. Saline desert has unique ecosystem containing well adapted microflora exclusive to the niche. In spite of the importance of ecological processes in saline desert ecosystem, dimin...

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Main Authors: Prachi Singh, Vrutika Patel, Datta Madamwar
Format: Article
Language:English
Published: Science Planet Inc. 2017-10-01
Series:Canadian Journal of Biotechnology
Online Access:https://www.canadianjbiotech.com/CAN_J_BIOTECH/Archives/v1/Special Issue/cjb.2017-a114.pdf
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spelling doaj-909edc2b43274e90b3580de03b9f447b2020-11-24T23:56:47ZengScience Planet Inc.Canadian Journal of Biotechnology2560-83042017-10-011Special Issue12812810.24870/cjb.2017-a114An Insight into the Microbial Community Structure of White Rann of Kachchh: A Study towards Functional Aspects and Taxonomic ProfilingPrachi Singh0Vrutika Patel1Datta Madamwar2Post Graduate Department of Biosciences, UGC-Centre of Advanced Study, Satellite Campus, Vadtal Road, Sardar Patel University, Bakrol 388 315, Anand, Gujarat, INDIAPost Graduate Department of Biosciences, UGC-Centre of Advanced Study, Satellite Campus, Vadtal Road, Sardar Patel University, Bakrol 388 315, Anand, Gujarat, INDIAPost Graduate Department of Biosciences, UGC-Centre of Advanced Study, Satellite Campus, Vadtal Road, Sardar Patel University, Bakrol 388 315, Anand, Gujarat, INDIAThe desert environment owns a distinctive set of microbial communities as compared to other environment across the globe. Saline desert has unique ecosystem containing well adapted microflora exclusive to the niche. In spite of the importance of ecological processes in saline desert ecosystem, diminutive amount of knowledge is known and understood about indigenous microbial community, functional diversity, biotechnologically potential genes, biogeochemical processes and carbon sequestration abilities. The present study describes the microbial community composition and their functional inheritance from the White Rann of Kachchh. The microbial population was pre-dominantly fashioned by bacteria species followed by archaea and eukaryota. The abundance of bacterial species Salinibacter (7.4%), Burkholderia (4.3%) of phylum Proteobacteria and Firmicutes, respectively was evidently observed, while archaeal population abundantly contains Haloarcula (14%) and Natromonas (8%) of phylum Euryarchaeota and Crenarchaeota, respectively. The functional capabilities were shaped by primarily by genes involved in amino acid transport and metabolism, carbohydrate transport and metabolism, energy production and conversion. This study revealed that the microbial community has developed mechanisms for carbon fixation, stress response, synthesis of osmoregulant to cope up with fluctuations of high and low osmotic pressure in this saline environment. The diversity indices suggested that this profound study may perhaps be more appropriate for better understanding of ecology, White Rann of Kachchh.https://www.canadianjbiotech.com/CAN_J_BIOTECH/Archives/v1/Special Issue/cjb.2017-a114.pdf
collection DOAJ
language English
format Article
sources DOAJ
author Prachi Singh
Vrutika Patel
Datta Madamwar
spellingShingle Prachi Singh
Vrutika Patel
Datta Madamwar
An Insight into the Microbial Community Structure of White Rann of Kachchh: A Study towards Functional Aspects and Taxonomic Profiling
Canadian Journal of Biotechnology
author_facet Prachi Singh
Vrutika Patel
Datta Madamwar
author_sort Prachi Singh
title An Insight into the Microbial Community Structure of White Rann of Kachchh: A Study towards Functional Aspects and Taxonomic Profiling
title_short An Insight into the Microbial Community Structure of White Rann of Kachchh: A Study towards Functional Aspects and Taxonomic Profiling
title_full An Insight into the Microbial Community Structure of White Rann of Kachchh: A Study towards Functional Aspects and Taxonomic Profiling
title_fullStr An Insight into the Microbial Community Structure of White Rann of Kachchh: A Study towards Functional Aspects and Taxonomic Profiling
title_full_unstemmed An Insight into the Microbial Community Structure of White Rann of Kachchh: A Study towards Functional Aspects and Taxonomic Profiling
title_sort insight into the microbial community structure of white rann of kachchh: a study towards functional aspects and taxonomic profiling
publisher Science Planet Inc.
series Canadian Journal of Biotechnology
issn 2560-8304
publishDate 2017-10-01
description The desert environment owns a distinctive set of microbial communities as compared to other environment across the globe. Saline desert has unique ecosystem containing well adapted microflora exclusive to the niche. In spite of the importance of ecological processes in saline desert ecosystem, diminutive amount of knowledge is known and understood about indigenous microbial community, functional diversity, biotechnologically potential genes, biogeochemical processes and carbon sequestration abilities. The present study describes the microbial community composition and their functional inheritance from the White Rann of Kachchh. The microbial population was pre-dominantly fashioned by bacteria species followed by archaea and eukaryota. The abundance of bacterial species Salinibacter (7.4%), Burkholderia (4.3%) of phylum Proteobacteria and Firmicutes, respectively was evidently observed, while archaeal population abundantly contains Haloarcula (14%) and Natromonas (8%) of phylum Euryarchaeota and Crenarchaeota, respectively. The functional capabilities were shaped by primarily by genes involved in amino acid transport and metabolism, carbohydrate transport and metabolism, energy production and conversion. This study revealed that the microbial community has developed mechanisms for carbon fixation, stress response, synthesis of osmoregulant to cope up with fluctuations of high and low osmotic pressure in this saline environment. The diversity indices suggested that this profound study may perhaps be more appropriate for better understanding of ecology, White Rann of Kachchh.
url https://www.canadianjbiotech.com/CAN_J_BIOTECH/Archives/v1/Special Issue/cjb.2017-a114.pdf
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