A simple model for glioma grading based on texture analysis applied to conventional brain MRI.

Accuracy of glioma grading is fundamental for the diagnosis, treatment planning and prognosis of patients. The purpose of this work was to develop a low-cost and easy-to-implement classification model which distinguishes low-grade gliomas (LGGs) from high-grade gliomas (HGGs), through texture analys...

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Main Authors: José Gerardo Suárez-García, Javier Miguel Hernández-López, Eduardo Moreno-Barbosa, Benito de Celis-Alonso
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0228972
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spelling doaj-8fb50404645f484598c01dea57f80c8e2021-03-03T21:42:41ZengPublic Library of Science (PLoS)PLoS ONE1932-62032020-01-01155e022897210.1371/journal.pone.0228972A simple model for glioma grading based on texture analysis applied to conventional brain MRI.José Gerardo Suárez-GarcíaJavier Miguel Hernández-LópezEduardo Moreno-BarbosaBenito de Celis-AlonsoAccuracy of glioma grading is fundamental for the diagnosis, treatment planning and prognosis of patients. The purpose of this work was to develop a low-cost and easy-to-implement classification model which distinguishes low-grade gliomas (LGGs) from high-grade gliomas (HGGs), through texture analysis applied to conventional brain MRI. Different combinations of MRI contrasts (T1Gd and T2) and one segmented glioma region (necrotic and non-enhancing tumor core, NCR/NET) were studied. Texture features obtained from the gray level size zone matrix (GLSZM) were calculated. An under-sampling method was proposed to divide the data into different training subsets and subsequently extract complementary information for the creation of distinct classification models. The sensitivity, specificity and accuracy of the models were calculated, and the best model explicitly reported. The best model included only three texture features and reached a sensitivity, specificity and accuracy of 94.12%, 88.24% and 91.18%, respectively. According to the features of the model, when the NCR/NET region was studied, HGGs had a more heterogeneous texture than LGGs in the T1Gd images, and LGGs had a more heterogeneous texture than HGGs in the T2 images. These novel results partially contrast with results from the literature. The best model proved to be useful for the classification of gliomas. Complementary results showed that the heterogeneity of gliomas depended on the MRI contrast studied. The chosen model stands out as a simple, low-cost, easy-to-implement, reproducible and highly accurate glioma classifier. Importantly, it should be accessible to populations with reduced economic and scientific resources.https://doi.org/10.1371/journal.pone.0228972
collection DOAJ
language English
format Article
sources DOAJ
author José Gerardo Suárez-García
Javier Miguel Hernández-López
Eduardo Moreno-Barbosa
Benito de Celis-Alonso
spellingShingle José Gerardo Suárez-García
Javier Miguel Hernández-López
Eduardo Moreno-Barbosa
Benito de Celis-Alonso
A simple model for glioma grading based on texture analysis applied to conventional brain MRI.
PLoS ONE
author_facet José Gerardo Suárez-García
Javier Miguel Hernández-López
Eduardo Moreno-Barbosa
Benito de Celis-Alonso
author_sort José Gerardo Suárez-García
title A simple model for glioma grading based on texture analysis applied to conventional brain MRI.
title_short A simple model for glioma grading based on texture analysis applied to conventional brain MRI.
title_full A simple model for glioma grading based on texture analysis applied to conventional brain MRI.
title_fullStr A simple model for glioma grading based on texture analysis applied to conventional brain MRI.
title_full_unstemmed A simple model for glioma grading based on texture analysis applied to conventional brain MRI.
title_sort simple model for glioma grading based on texture analysis applied to conventional brain mri.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2020-01-01
description Accuracy of glioma grading is fundamental for the diagnosis, treatment planning and prognosis of patients. The purpose of this work was to develop a low-cost and easy-to-implement classification model which distinguishes low-grade gliomas (LGGs) from high-grade gliomas (HGGs), through texture analysis applied to conventional brain MRI. Different combinations of MRI contrasts (T1Gd and T2) and one segmented glioma region (necrotic and non-enhancing tumor core, NCR/NET) were studied. Texture features obtained from the gray level size zone matrix (GLSZM) were calculated. An under-sampling method was proposed to divide the data into different training subsets and subsequently extract complementary information for the creation of distinct classification models. The sensitivity, specificity and accuracy of the models were calculated, and the best model explicitly reported. The best model included only three texture features and reached a sensitivity, specificity and accuracy of 94.12%, 88.24% and 91.18%, respectively. According to the features of the model, when the NCR/NET region was studied, HGGs had a more heterogeneous texture than LGGs in the T1Gd images, and LGGs had a more heterogeneous texture than HGGs in the T2 images. These novel results partially contrast with results from the literature. The best model proved to be useful for the classification of gliomas. Complementary results showed that the heterogeneity of gliomas depended on the MRI contrast studied. The chosen model stands out as a simple, low-cost, easy-to-implement, reproducible and highly accurate glioma classifier. Importantly, it should be accessible to populations with reduced economic and scientific resources.
url https://doi.org/10.1371/journal.pone.0228972
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