Convolutional auto-encoder for image denoising of ultra-low-dose CT

Objectives: The purpose of this study was to validate a patch-based image denoising method for ultra-low-dose CT images. Neural network with convolutional auto-encoder and pairs of standard-dose CT and ultra-low-dose CT image patches were used for image denoising. The performance of the proposed met...

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Main Authors: Mizuho Nishio, Chihiro Nagashima, Saori Hirabayashi, Akinori Ohnishi, Kaori Sasaki, Tomoyuki Sagawa, Masayuki Hamada, Tatsuo Yamashita
Format: Article
Language:English
Published: Elsevier 2017-08-01
Series:Heliyon
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2405844016321600
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spelling doaj-8ddaeb5498374bac91f5ee8130a6106a2020-11-25T02:12:26ZengElsevierHeliyon2405-84402017-08-013810.1016/j.heliyon.2017.e00393Convolutional auto-encoder for image denoising of ultra-low-dose CTMizuho Nishio0Chihiro Nagashima1Saori Hirabayashi2Akinori Ohnishi3Kaori Sasaki4Tomoyuki Sagawa5Masayuki Hamada6Tatsuo Yamashita7Clinical PET Center, Institute of Biomedical Research and Innovation, 2-2, Minatojimaminamimachi, Chuo-ku, Kobe, Hyogo 650-0047, JapanClinical PET Center, Institute of Biomedical Research and Innovation, 2-2, Minatojimaminamimachi, Chuo-ku, Kobe, Hyogo 650-0047, JapanClinical PET Center, Institute of Biomedical Research and Innovation, 2-2, Minatojimaminamimachi, Chuo-ku, Kobe, Hyogo 650-0047, JapanDivision of Molecular Imaging, Institute of Biomedical Research and Innovation, 2-2, Minatojimaminamimachi, Chuo-ku, Kobe, Hyogo 650-0047, JapanDepartment of Radiology, Kobe University Graduate School of Medicine, 7-5-2 Kusunoki-cho, Chuo-ku, Kobe, Hyogo 650-0017, JapanClinical PET Center, Institute of Biomedical Research and Innovation, 2-2, Minatojimaminamimachi, Chuo-ku, Kobe, Hyogo 650-0047, JapanClinical PET Center, Institute of Biomedical Research and Innovation, 2-2, Minatojimaminamimachi, Chuo-ku, Kobe, Hyogo 650-0047, JapanClinical PET Center, Institute of Biomedical Research and Innovation, 2-2, Minatojimaminamimachi, Chuo-ku, Kobe, Hyogo 650-0047, JapanObjectives: The purpose of this study was to validate a patch-based image denoising method for ultra-low-dose CT images. Neural network with convolutional auto-encoder and pairs of standard-dose CT and ultra-low-dose CT image patches were used for image denoising. The performance of the proposed method was measured by using a chest phantom. Materials and methods: Standard-dose and ultra-low-dose CT images of the chest phantom were acquired. The tube currents for standard-dose and ultra-low-dose CT were 300 and 10 mA, respectively. Ultra-low-dose CT images were denoised with our proposed method using neural network, large-scale nonlocal mean, and block-matching and 3D filtering. Five radiologists and three technologists assessed the denoised ultra-low-dose CT images visually and recorded their subjective impressions of streak artifacts, noise other than streak artifacts, visualization of pulmonary vessels, and overall image quality. Results: For the streak artifacts, noise other than streak artifacts, and visualization of pulmonary vessels, the results of our proposed method were statistically better than those of block-matching and 3D filtering (p-values < 0.05). On the other hand, the difference in the overall image quality between our proposed method and block-matching and 3D filtering was not statistically significant (p-value = 0.07272). The p-values obtained between our proposed method and large-scale nonlocal mean were all less than 0.05. Conclusion: Neural network with convolutional auto-encoder could be trained using pairs of standard-dose and ultra-low-dose CT image patches. According to the visual assessment by radiologists and technologists, the performance of our proposed method was superior to that of large-scale nonlocal mean and block-matching and 3D filtering.http://www.sciencedirect.com/science/article/pii/S2405844016321600Computer scienceMedical imaging
collection DOAJ
language English
format Article
sources DOAJ
author Mizuho Nishio
Chihiro Nagashima
Saori Hirabayashi
Akinori Ohnishi
Kaori Sasaki
Tomoyuki Sagawa
Masayuki Hamada
Tatsuo Yamashita
spellingShingle Mizuho Nishio
Chihiro Nagashima
Saori Hirabayashi
Akinori Ohnishi
Kaori Sasaki
Tomoyuki Sagawa
Masayuki Hamada
Tatsuo Yamashita
Convolutional auto-encoder for image denoising of ultra-low-dose CT
Heliyon
Computer science
Medical imaging
author_facet Mizuho Nishio
Chihiro Nagashima
Saori Hirabayashi
Akinori Ohnishi
Kaori Sasaki
Tomoyuki Sagawa
Masayuki Hamada
Tatsuo Yamashita
author_sort Mizuho Nishio
title Convolutional auto-encoder for image denoising of ultra-low-dose CT
title_short Convolutional auto-encoder for image denoising of ultra-low-dose CT
title_full Convolutional auto-encoder for image denoising of ultra-low-dose CT
title_fullStr Convolutional auto-encoder for image denoising of ultra-low-dose CT
title_full_unstemmed Convolutional auto-encoder for image denoising of ultra-low-dose CT
title_sort convolutional auto-encoder for image denoising of ultra-low-dose ct
publisher Elsevier
series Heliyon
issn 2405-8440
publishDate 2017-08-01
description Objectives: The purpose of this study was to validate a patch-based image denoising method for ultra-low-dose CT images. Neural network with convolutional auto-encoder and pairs of standard-dose CT and ultra-low-dose CT image patches were used for image denoising. The performance of the proposed method was measured by using a chest phantom. Materials and methods: Standard-dose and ultra-low-dose CT images of the chest phantom were acquired. The tube currents for standard-dose and ultra-low-dose CT were 300 and 10 mA, respectively. Ultra-low-dose CT images were denoised with our proposed method using neural network, large-scale nonlocal mean, and block-matching and 3D filtering. Five radiologists and three technologists assessed the denoised ultra-low-dose CT images visually and recorded their subjective impressions of streak artifacts, noise other than streak artifacts, visualization of pulmonary vessels, and overall image quality. Results: For the streak artifacts, noise other than streak artifacts, and visualization of pulmonary vessels, the results of our proposed method were statistically better than those of block-matching and 3D filtering (p-values < 0.05). On the other hand, the difference in the overall image quality between our proposed method and block-matching and 3D filtering was not statistically significant (p-value = 0.07272). The p-values obtained between our proposed method and large-scale nonlocal mean were all less than 0.05. Conclusion: Neural network with convolutional auto-encoder could be trained using pairs of standard-dose and ultra-low-dose CT image patches. According to the visual assessment by radiologists and technologists, the performance of our proposed method was superior to that of large-scale nonlocal mean and block-matching and 3D filtering.
topic Computer science
Medical imaging
url http://www.sciencedirect.com/science/article/pii/S2405844016321600
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