Development of QSAR model for immunomodulatory activity of natural coumarinolignoids

Dharmendra K Yadav, Abha Meena, Ankit Srivastava, D Chanda, Feroz Khan, SK ChattopadhyayMetabolic and Structural Biology Department, Central Institute of Medicinal and Aromatic Plants, Council of Scientific and Industrial Research, PO-CIMAP, IndiaAbstract: Immunomodulation is the process of alterati...

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Main Authors: Dharmendra K Yadav, Abha Meena, Ankit Srivastava, et al
Format: Article
Language:English
Published: Dove Medical Press 2010-07-01
Series:Drug Design, Development and Therapy
Online Access:http://www.dovepress.com/development-of-qsar-model-for-immunomodulatory-activity-of-natural-cou-a4945
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spelling doaj-8dd9b27a68b549778c7aa35c2ea95b162020-11-24T23:46:16ZengDove Medical PressDrug Design, Development and Therapy1177-88812010-07-012010default173186Development of QSAR model for immunomodulatory activity of natural coumarinolignoidsDharmendra K YadavAbha MeenaAnkit Srivastavaet alDharmendra K Yadav, Abha Meena, Ankit Srivastava, D Chanda, Feroz Khan, SK ChattopadhyayMetabolic and Structural Biology Department, Central Institute of Medicinal and Aromatic Plants, Council of Scientific and Industrial Research, PO-CIMAP, IndiaAbstract: Immunomodulation is the process of alteration in immune response due to foreign intrusion of molecules inside the body. Along with the available drugs, a large number of herbal drugs are promoted in traditional Indian treatments, for their immunomodulating activity. Natural coumarinolignoids isolated from the seeds of Cleome viscose have been recognized as having hepatoprotective action and have recently been tested preclinically for their immunomodulatory activity affecting both cell-mediated and humoral immune response. To explore the immunomodulatory compound from derivatives of coumarinolignoids, a quantitative structure activity relationship (QSAR) and molecular docking studies were performed. Theoretical results are in accord with the in vivo experimental data studied on Swiss albino mice. Immunostimulatory activity was predicted through QSAR model, developed by forward feed multiple linear regression method with leave-one-out approach. Relationship correlating measure of QSAR model was 99% (R2 = 0.99) and predictive accuracy was 96% (RCV2 = 0.96). QSAR studies indicate that dipole moment, steric energy, amide group count, lambda max (UV-visible), and molar refractivity correlates well with biological activity, while decrease in dipole moment, steric energy, and molar refractivity has negative correlation. Docking studies also showed strong binding affinity to immunomodulatory receptors.Keywords: coumarinolignoids, immunomodulation, docking, QSAR, regression model http://www.dovepress.com/development-of-qsar-model-for-immunomodulatory-activity-of-natural-cou-a4945
collection DOAJ
language English
format Article
sources DOAJ
author Dharmendra K Yadav
Abha Meena
Ankit Srivastava
et al
spellingShingle Dharmendra K Yadav
Abha Meena
Ankit Srivastava
et al
Development of QSAR model for immunomodulatory activity of natural coumarinolignoids
Drug Design, Development and Therapy
author_facet Dharmendra K Yadav
Abha Meena
Ankit Srivastava
et al
author_sort Dharmendra K Yadav
title Development of QSAR model for immunomodulatory activity of natural coumarinolignoids
title_short Development of QSAR model for immunomodulatory activity of natural coumarinolignoids
title_full Development of QSAR model for immunomodulatory activity of natural coumarinolignoids
title_fullStr Development of QSAR model for immunomodulatory activity of natural coumarinolignoids
title_full_unstemmed Development of QSAR model for immunomodulatory activity of natural coumarinolignoids
title_sort development of qsar model for immunomodulatory activity of natural coumarinolignoids
publisher Dove Medical Press
series Drug Design, Development and Therapy
issn 1177-8881
publishDate 2010-07-01
description Dharmendra K Yadav, Abha Meena, Ankit Srivastava, D Chanda, Feroz Khan, SK ChattopadhyayMetabolic and Structural Biology Department, Central Institute of Medicinal and Aromatic Plants, Council of Scientific and Industrial Research, PO-CIMAP, IndiaAbstract: Immunomodulation is the process of alteration in immune response due to foreign intrusion of molecules inside the body. Along with the available drugs, a large number of herbal drugs are promoted in traditional Indian treatments, for their immunomodulating activity. Natural coumarinolignoids isolated from the seeds of Cleome viscose have been recognized as having hepatoprotective action and have recently been tested preclinically for their immunomodulatory activity affecting both cell-mediated and humoral immune response. To explore the immunomodulatory compound from derivatives of coumarinolignoids, a quantitative structure activity relationship (QSAR) and molecular docking studies were performed. Theoretical results are in accord with the in vivo experimental data studied on Swiss albino mice. Immunostimulatory activity was predicted through QSAR model, developed by forward feed multiple linear regression method with leave-one-out approach. Relationship correlating measure of QSAR model was 99% (R2 = 0.99) and predictive accuracy was 96% (RCV2 = 0.96). QSAR studies indicate that dipole moment, steric energy, amide group count, lambda max (UV-visible), and molar refractivity correlates well with biological activity, while decrease in dipole moment, steric energy, and molar refractivity has negative correlation. Docking studies also showed strong binding affinity to immunomodulatory receptors.Keywords: coumarinolignoids, immunomodulation, docking, QSAR, regression model
url http://www.dovepress.com/development-of-qsar-model-for-immunomodulatory-activity-of-natural-cou-a4945
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