TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity

TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity

Diffusion MRI tractography processing pipeline requires a large number of steps (typically 20+ steps). If parameters of these steps, number of threads, and random seed generators are not carefully controlled, the resulting tractography can easily be non-reproducible and non-replicable, even in test-...

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Bibliographic Details
Main Authors: Guillaume Theaud, Jean-Christophe Houde, Arnaud Boré, François Rheault, Felix Morency, Maxime Descoteaux
Format: Article
Language:English
Published: Elsevier 2020-09-01
Series:NeuroImage
Subjects:
Diffusion MRI
Pipeline
Tractography
Reproducibility
BIDS
Nextflow
Online Access:http://www.sciencedirect.com/science/article/pii/S105381192030375X

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