Clinical and Genetic Spectra of Inherited Liver Disease in Children in China

Background: Children presenting with chronic liver disease or acute liver failure often have an underlying genetic disorder. The aim of this study was to analyze the clinical and genetic spectra of inherited liver disease in children in a tertiary hospital.Methods: A total of 172 patients were class...

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Main Authors: Youhong Fang, Jindan Yu, Jingan Lou, Kerong Peng, Hong Zhao, Jie Chen
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-03-01
Series:Frontiers in Pediatrics
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fped.2021.631620/full
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spelling doaj-89f58b18b45d4c9bb569f061dccecfe92021-03-04T06:23:21ZengFrontiers Media S.A.Frontiers in Pediatrics2296-23602021-03-01910.3389/fped.2021.631620631620Clinical and Genetic Spectra of Inherited Liver Disease in Children in ChinaYouhong FangJindan YuJingan LouKerong PengHong ZhaoJie ChenBackground: Children presenting with chronic liver disease or acute liver failure often have an underlying genetic disorder. The aim of this study was to analyze the clinical and genetic spectra of inherited liver disease in children in a tertiary hospital.Methods: A total of 172 patients were classified into three groups according to their clinical presentation: cholestasis (Group A), liver enzyme elevation (Group B), and hepato/splenomegaly (Group C). Next-generation sequencing (NGS) was performed on all patients recruited in this study. The genotypic and phenotypic spectra of disease in these patients were reviewed.Results: The median age at enrollment of the 172 patients was 12.0 months (IQR: 4.9, 42.5 months), with 52.3% males and 47.7% females. The overall diagnostic rate was 55.8% (96/172) in this group. The diagnostic rates of whole-exome sequencing (WES) and targeted gene panel sequencing (TGPS) were 47.2% and 62.0%, respectively (no significant difference, p = 0.054). We identified 25 genes related to different phenotypes, including 46 novel disease-related pathogenic mutations. The diagnostic rates in the three groups were 46.0% (29/63), 48.6% (34/70), and 84.6% (33/39). ATP7B, SLC25A13, and G6PC were the top three genes related to monogenic liver disease in this study.Conclusion: WES and TGPS show similar diagnostic rates in the diagnosis of monogenic liver disease. NGS has an important role in the diagnosis of monogenetic liver disease and can provide more precise medical treatment and predict the prognosis of these diseases.https://www.frontiersin.org/articles/10.3389/fped.2021.631620/fullgenotypephenotypenext-generation sequencingchildinherited liver disease
collection DOAJ
language English
format Article
sources DOAJ
author Youhong Fang
Jindan Yu
Jingan Lou
Kerong Peng
Hong Zhao
Jie Chen
spellingShingle Youhong Fang
Jindan Yu
Jingan Lou
Kerong Peng
Hong Zhao
Jie Chen
Clinical and Genetic Spectra of Inherited Liver Disease in Children in China
Frontiers in Pediatrics
genotype
phenotype
next-generation sequencing
child
inherited liver disease
author_facet Youhong Fang
Jindan Yu
Jingan Lou
Kerong Peng
Hong Zhao
Jie Chen
author_sort Youhong Fang
title Clinical and Genetic Spectra of Inherited Liver Disease in Children in China
title_short Clinical and Genetic Spectra of Inherited Liver Disease in Children in China
title_full Clinical and Genetic Spectra of Inherited Liver Disease in Children in China
title_fullStr Clinical and Genetic Spectra of Inherited Liver Disease in Children in China
title_full_unstemmed Clinical and Genetic Spectra of Inherited Liver Disease in Children in China
title_sort clinical and genetic spectra of inherited liver disease in children in china
publisher Frontiers Media S.A.
series Frontiers in Pediatrics
issn 2296-2360
publishDate 2021-03-01
description Background: Children presenting with chronic liver disease or acute liver failure often have an underlying genetic disorder. The aim of this study was to analyze the clinical and genetic spectra of inherited liver disease in children in a tertiary hospital.Methods: A total of 172 patients were classified into three groups according to their clinical presentation: cholestasis (Group A), liver enzyme elevation (Group B), and hepato/splenomegaly (Group C). Next-generation sequencing (NGS) was performed on all patients recruited in this study. The genotypic and phenotypic spectra of disease in these patients were reviewed.Results: The median age at enrollment of the 172 patients was 12.0 months (IQR: 4.9, 42.5 months), with 52.3% males and 47.7% females. The overall diagnostic rate was 55.8% (96/172) in this group. The diagnostic rates of whole-exome sequencing (WES) and targeted gene panel sequencing (TGPS) were 47.2% and 62.0%, respectively (no significant difference, p = 0.054). We identified 25 genes related to different phenotypes, including 46 novel disease-related pathogenic mutations. The diagnostic rates in the three groups were 46.0% (29/63), 48.6% (34/70), and 84.6% (33/39). ATP7B, SLC25A13, and G6PC were the top three genes related to monogenic liver disease in this study.Conclusion: WES and TGPS show similar diagnostic rates in the diagnosis of monogenic liver disease. NGS has an important role in the diagnosis of monogenetic liver disease and can provide more precise medical treatment and predict the prognosis of these diseases.
topic genotype
phenotype
next-generation sequencing
child
inherited liver disease
url https://www.frontiersin.org/articles/10.3389/fped.2021.631620/full
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