Rapid evolution of the human mutation spectrum

DNA is a remarkably precise medium for copying and storing biological information. This high fidelity results from the action of hundreds of genes involved in replication, proofreading, and damage repair. Evolutionary theory suggests that in such a system, selection has limited ability to remove gen...

Full description

Bibliographic Details
Main Authors: Kelley Harris, Jonathan K Pritchard
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2017-04-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/24284
id doaj-899c237035854f94a1f8f16e9c5f6a24
record_format Article
spelling doaj-899c237035854f94a1f8f16e9c5f6a242021-05-05T13:25:47ZengeLife Sciences Publications LtdeLife2050-084X2017-04-01610.7554/eLife.24284Rapid evolution of the human mutation spectrumKelley Harris0https://orcid.org/0000-0003-0302-2523Jonathan K Pritchard1Department of Genetics, Stanford University, Stanford, United StatesDepartment of Genetics, Stanford University, Stanford, United States; Department of Biology, Stanford University, Stanford, United States; Howard Hughes Medical Institute, Stanford University, Stanford, United StatesDNA is a remarkably precise medium for copying and storing biological information. This high fidelity results from the action of hundreds of genes involved in replication, proofreading, and damage repair. Evolutionary theory suggests that in such a system, selection has limited ability to remove genetic variants that change mutation rates by small amounts or in specific sequence contexts. Consistent with this, using SNV variation as a proxy for mutational input, we report here that mutational spectra differ substantially among species, human continental groups and even some closely related populations. Close examination of one signal, an increased TCC[Formula: see text]TTC mutation rate in Europeans, indicates a burst of mutations from about 15,000 to 2000 years ago, perhaps due to the appearance, drift, and ultimate elimination of a genetic modifier of mutation rate. Our results suggest that mutation rates can evolve markedly over short evolutionary timescales and suggest the possibility of mapping mutational modifiers.https://elifesciences.org/articles/24284population geneticsmutagenesisgreat ape evolutionDNA replication and repairmutational signaturesHuman population structure
collection DOAJ
language English
format Article
sources DOAJ
author Kelley Harris
Jonathan K Pritchard
spellingShingle Kelley Harris
Jonathan K Pritchard
Rapid evolution of the human mutation spectrum
eLife
population genetics
mutagenesis
great ape evolution
DNA replication and repair
mutational signatures
Human population structure
author_facet Kelley Harris
Jonathan K Pritchard
author_sort Kelley Harris
title Rapid evolution of the human mutation spectrum
title_short Rapid evolution of the human mutation spectrum
title_full Rapid evolution of the human mutation spectrum
title_fullStr Rapid evolution of the human mutation spectrum
title_full_unstemmed Rapid evolution of the human mutation spectrum
title_sort rapid evolution of the human mutation spectrum
publisher eLife Sciences Publications Ltd
series eLife
issn 2050-084X
publishDate 2017-04-01
description DNA is a remarkably precise medium for copying and storing biological information. This high fidelity results from the action of hundreds of genes involved in replication, proofreading, and damage repair. Evolutionary theory suggests that in such a system, selection has limited ability to remove genetic variants that change mutation rates by small amounts or in specific sequence contexts. Consistent with this, using SNV variation as a proxy for mutational input, we report here that mutational spectra differ substantially among species, human continental groups and even some closely related populations. Close examination of one signal, an increased TCC[Formula: see text]TTC mutation rate in Europeans, indicates a burst of mutations from about 15,000 to 2000 years ago, perhaps due to the appearance, drift, and ultimate elimination of a genetic modifier of mutation rate. Our results suggest that mutation rates can evolve markedly over short evolutionary timescales and suggest the possibility of mapping mutational modifiers.
topic population genetics
mutagenesis
great ape evolution
DNA replication and repair
mutational signatures
Human population structure
url https://elifesciences.org/articles/24284
work_keys_str_mv AT kelleyharris rapidevolutionofthehumanmutationspectrum
AT jonathankpritchard rapidevolutionofthehumanmutationspectrum
_version_ 1721462013356408832