Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)

As aquatic animals, fishes often encounter various situations of low oxygen, and they have evolved the ability to respond to hypoxia stress. Studies of physiological and molecular responses to hypoxia stress are essential to clarify genetic mechanisms underlying hypoxia tolerance in fish. In this st...

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Main Authors: Ying Zhou, Weiwei Luo, Xiaomu Yu, Junru Wang, Yizhao Feng, Jingou Tong
Format: Article
Language:English
Published: MDPI AG 2020-08-01
Series:Animals
Subjects:
Online Access:https://www.mdpi.com/2076-2615/10/9/1483
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spelling doaj-88d7724178874306abc963c37890b2172020-11-25T03:40:06ZengMDPI AGAnimals2076-26152020-08-01101483148310.3390/ani10091483Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)Ying Zhou0Weiwei Luo1Xiaomu Yu2Junru Wang3Yizhao Feng4Jingou Tong5State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaAs aquatic animals, fishes often encounter various situations of low oxygen, and they have evolved the ability to respond to hypoxia stress. Studies of physiological and molecular responses to hypoxia stress are essential to clarify genetic mechanisms underlying hypoxia tolerance in fish. In this study, we performed acute hypoxia treatment in juvenile bighead carp (<i>Hypophthalmicthys nobilis</i>) by decreasing water O<sub>2</sub> from 6.5 mg/L to 0.5 mg/L in three hours. This hypoxia stress resulted in a significant increase in blood lactate and serum glucose. Comparisons of heart transcriptome among hypoxia tolerant (HT), hypoxia sensitive (HS), and normoxia control (NC) groups showed that 820, 273, and 301 differentially expressed genes (DEGs) were identified in HS vs. HT, NC vs. HS, and NC vs. HT (false discovery rate (FDR) < 0.01, Fold Change> 2), respectively. KEGG pathway enrichment showed that DEGs between HS and HT groups were mainly involved in mitogen-activated protein kinase (MAPK) signaling, insulin signaling, apoptosis, tight junction and adrenergic signaling in cardiomyocytes pathways, and DEGs in MAPK signaling pathway played a key role in cardiac tolerance to hypoxia. Combined with the results of our previous cDNA-amplified fragment length polymorphism (cDNA-AFLP) analysis of hypoxia stress in this species, such genes as <i>stbp2</i>, <i>ttn</i>, <i>mapk</i>, <i>kcnh</i>, and <i>tnfrsf</i> were identified in both studies, representing the significance of these DEGs in hypoxia tolerance in bighead carp. These results provide insights into the understanding of genetic modulations for fish heart coping with hypoxia stress and generate basic resources for future breeding studies of hypoxia resistance in bighead carp.https://www.mdpi.com/2076-2615/10/9/1483bighead carphypoxia stressRNA-seqcDNA-AFLPMAPK signaling pathway
collection DOAJ
language English
format Article
sources DOAJ
author Ying Zhou
Weiwei Luo
Xiaomu Yu
Junru Wang
Yizhao Feng
Jingou Tong
spellingShingle Ying Zhou
Weiwei Luo
Xiaomu Yu
Junru Wang
Yizhao Feng
Jingou Tong
Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)
Animals
bighead carp
hypoxia stress
RNA-seq
cDNA-AFLP
MAPK signaling pathway
author_facet Ying Zhou
Weiwei Luo
Xiaomu Yu
Junru Wang
Yizhao Feng
Jingou Tong
author_sort Ying Zhou
title Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)
title_short Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)
title_full Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)
title_fullStr Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)
title_full_unstemmed Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)
title_sort cardiac transcriptomics reveals that mapk pathway plays an important role in hypoxia tolerance in bighead carp (<i>hypophthalmichthys nobilis</i>)
publisher MDPI AG
series Animals
issn 2076-2615
publishDate 2020-08-01
description As aquatic animals, fishes often encounter various situations of low oxygen, and they have evolved the ability to respond to hypoxia stress. Studies of physiological and molecular responses to hypoxia stress are essential to clarify genetic mechanisms underlying hypoxia tolerance in fish. In this study, we performed acute hypoxia treatment in juvenile bighead carp (<i>Hypophthalmicthys nobilis</i>) by decreasing water O<sub>2</sub> from 6.5 mg/L to 0.5 mg/L in three hours. This hypoxia stress resulted in a significant increase in blood lactate and serum glucose. Comparisons of heart transcriptome among hypoxia tolerant (HT), hypoxia sensitive (HS), and normoxia control (NC) groups showed that 820, 273, and 301 differentially expressed genes (DEGs) were identified in HS vs. HT, NC vs. HS, and NC vs. HT (false discovery rate (FDR) < 0.01, Fold Change> 2), respectively. KEGG pathway enrichment showed that DEGs between HS and HT groups were mainly involved in mitogen-activated protein kinase (MAPK) signaling, insulin signaling, apoptosis, tight junction and adrenergic signaling in cardiomyocytes pathways, and DEGs in MAPK signaling pathway played a key role in cardiac tolerance to hypoxia. Combined with the results of our previous cDNA-amplified fragment length polymorphism (cDNA-AFLP) analysis of hypoxia stress in this species, such genes as <i>stbp2</i>, <i>ttn</i>, <i>mapk</i>, <i>kcnh</i>, and <i>tnfrsf</i> were identified in both studies, representing the significance of these DEGs in hypoxia tolerance in bighead carp. These results provide insights into the understanding of genetic modulations for fish heart coping with hypoxia stress and generate basic resources for future breeding studies of hypoxia resistance in bighead carp.
topic bighead carp
hypoxia stress
RNA-seq
cDNA-AFLP
MAPK signaling pathway
url https://www.mdpi.com/2076-2615/10/9/1483
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