Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)
As aquatic animals, fishes often encounter various situations of low oxygen, and they have evolved the ability to respond to hypoxia stress. Studies of physiological and molecular responses to hypoxia stress are essential to clarify genetic mechanisms underlying hypoxia tolerance in fish. In this st...
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doaj-88d7724178874306abc963c37890b2172020-11-25T03:40:06ZengMDPI AGAnimals2076-26152020-08-01101483148310.3390/ani10091483Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>)Ying Zhou0Weiwei Luo1Xiaomu Yu2Junru Wang3Yizhao Feng4Jingou Tong5State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaState Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Innovation Academy of Seed Design, Chinese Academy of Sciences, Wuhan 430072, ChinaAs aquatic animals, fishes often encounter various situations of low oxygen, and they have evolved the ability to respond to hypoxia stress. Studies of physiological and molecular responses to hypoxia stress are essential to clarify genetic mechanisms underlying hypoxia tolerance in fish. In this study, we performed acute hypoxia treatment in juvenile bighead carp (<i>Hypophthalmicthys nobilis</i>) by decreasing water O<sub>2</sub> from 6.5 mg/L to 0.5 mg/L in three hours. This hypoxia stress resulted in a significant increase in blood lactate and serum glucose. Comparisons of heart transcriptome among hypoxia tolerant (HT), hypoxia sensitive (HS), and normoxia control (NC) groups showed that 820, 273, and 301 differentially expressed genes (DEGs) were identified in HS vs. HT, NC vs. HS, and NC vs. HT (false discovery rate (FDR) < 0.01, Fold Change> 2), respectively. KEGG pathway enrichment showed that DEGs between HS and HT groups were mainly involved in mitogen-activated protein kinase (MAPK) signaling, insulin signaling, apoptosis, tight junction and adrenergic signaling in cardiomyocytes pathways, and DEGs in MAPK signaling pathway played a key role in cardiac tolerance to hypoxia. Combined with the results of our previous cDNA-amplified fragment length polymorphism (cDNA-AFLP) analysis of hypoxia stress in this species, such genes as <i>stbp2</i>, <i>ttn</i>, <i>mapk</i>, <i>kcnh</i>, and <i>tnfrsf</i> were identified in both studies, representing the significance of these DEGs in hypoxia tolerance in bighead carp. These results provide insights into the understanding of genetic modulations for fish heart coping with hypoxia stress and generate basic resources for future breeding studies of hypoxia resistance in bighead carp.https://www.mdpi.com/2076-2615/10/9/1483bighead carphypoxia stressRNA-seqcDNA-AFLPMAPK signaling pathway |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Ying Zhou Weiwei Luo Xiaomu Yu Junru Wang Yizhao Feng Jingou Tong |
spellingShingle |
Ying Zhou Weiwei Luo Xiaomu Yu Junru Wang Yizhao Feng Jingou Tong Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>) Animals bighead carp hypoxia stress RNA-seq cDNA-AFLP MAPK signaling pathway |
author_facet |
Ying Zhou Weiwei Luo Xiaomu Yu Junru Wang Yizhao Feng Jingou Tong |
author_sort |
Ying Zhou |
title |
Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>) |
title_short |
Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>) |
title_full |
Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>) |
title_fullStr |
Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>) |
title_full_unstemmed |
Cardiac Transcriptomics Reveals That MAPK Pathway Plays an Important Role in Hypoxia Tolerance in Bighead Carp (<i>Hypophthalmichthys nobilis</i>) |
title_sort |
cardiac transcriptomics reveals that mapk pathway plays an important role in hypoxia tolerance in bighead carp (<i>hypophthalmichthys nobilis</i>) |
publisher |
MDPI AG |
series |
Animals |
issn |
2076-2615 |
publishDate |
2020-08-01 |
description |
As aquatic animals, fishes often encounter various situations of low oxygen, and they have evolved the ability to respond to hypoxia stress. Studies of physiological and molecular responses to hypoxia stress are essential to clarify genetic mechanisms underlying hypoxia tolerance in fish. In this study, we performed acute hypoxia treatment in juvenile bighead carp (<i>Hypophthalmicthys nobilis</i>) by decreasing water O<sub>2</sub> from 6.5 mg/L to 0.5 mg/L in three hours. This hypoxia stress resulted in a significant increase in blood lactate and serum glucose. Comparisons of heart transcriptome among hypoxia tolerant (HT), hypoxia sensitive (HS), and normoxia control (NC) groups showed that 820, 273, and 301 differentially expressed genes (DEGs) were identified in HS vs. HT, NC vs. HS, and NC vs. HT (false discovery rate (FDR) < 0.01, Fold Change> 2), respectively. KEGG pathway enrichment showed that DEGs between HS and HT groups were mainly involved in mitogen-activated protein kinase (MAPK) signaling, insulin signaling, apoptosis, tight junction and adrenergic signaling in cardiomyocytes pathways, and DEGs in MAPK signaling pathway played a key role in cardiac tolerance to hypoxia. Combined with the results of our previous cDNA-amplified fragment length polymorphism (cDNA-AFLP) analysis of hypoxia stress in this species, such genes as <i>stbp2</i>, <i>ttn</i>, <i>mapk</i>, <i>kcnh</i>, and <i>tnfrsf</i> were identified in both studies, representing the significance of these DEGs in hypoxia tolerance in bighead carp. These results provide insights into the understanding of genetic modulations for fish heart coping with hypoxia stress and generate basic resources for future breeding studies of hypoxia resistance in bighead carp. |
topic |
bighead carp hypoxia stress RNA-seq cDNA-AFLP MAPK signaling pathway |
url |
https://www.mdpi.com/2076-2615/10/9/1483 |
work_keys_str_mv |
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