Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea

Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea

We report the draft genome sequence and annotation of Leisingera aquaemixtae CECT 8399T (DDBJ/EMBL/GenBank accession number CYSR00000000) which comprises 4,614,060 bp, 4313 protein coding genes, 54 tRNA coding genes and 7 rRNA coding genes. General findings of the annotated genome, such as pigment i...

Full description

Bibliographic Details
Main Authors: Lidia Rodrigo-Torres, María J. Pujalte, David R. Arahal
Format: Article
Language:English
Published: Elsevier 2016-03-01
Series:Genomics Data
Online Access:http://www.sciencedirect.com/science/article/pii/S2213596016300101
id doaj-8895bd83e48445ea8a50b699a8397c14
record_format Article
spelling doaj-8895bd83e48445ea8a50b699a8397c142020-11-25T02:29:02ZengElsevierGenomics Data2213-59602016-03-017233236Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South KoreaLidia Rodrigo-Torres0María J. Pujalte1David R. Arahal2Departamento de Microbiología y Ecología, Universidad de Valencia, Valencia, Spain; Colección Española de Cultivos Tipo (CECT), Universidad de Valencia, Valencia, SpainDepartamento de Microbiología y Ecología, Universidad de Valencia, Valencia, Spain; Colección Española de Cultivos Tipo (CECT), Universidad de Valencia, Valencia, SpainCorresponding author at: Departamento de Microbiología y Ecología, Universidad de Valencia, Valencia, Spain.; Departamento de Microbiología y Ecología, Universidad de Valencia, Valencia, Spain; Colección Española de Cultivos Tipo (CECT), Universidad de Valencia, Valencia, SpainWe report the draft genome sequence and annotation of Leisingera aquaemixtae CECT 8399T (DDBJ/EMBL/GenBank accession number CYSR00000000) which comprises 4,614,060 bp, 4313 protein coding genes, 54 tRNA coding genes and 7 rRNA coding genes. General findings of the annotated genome, such as pigment indigoidine operon, phenylacetate oxidation genes or predictable number of replicons, are commented in comparison to other Leisingera species. Average Nucleotide Identity between available genomes of type strains of species of Leisingera and Phaeobacter genera has been calculated to evaluate its current classification. Keywords: Rhodobacteraceae, Phaeobacter, Ectoine, Indigoidine, Phenylacetate degradationhttp://www.sciencedirect.com/science/article/pii/S2213596016300101
collection DOAJ
language English
format Article
sources DOAJ
author Lidia Rodrigo-Torres
María J. Pujalte
David R. Arahal
spellingShingle Lidia Rodrigo-Torres
María J. Pujalte
David R. Arahal
Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
Genomics Data
author_facet Lidia Rodrigo-Torres
María J. Pujalte
David R. Arahal
author_sort Lidia Rodrigo-Torres
title Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_short Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_full Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_fullStr Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_full_unstemmed Draft genome of Leisingera aquaemixtae CECT 8399T, a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_sort draft genome of leisingera aquaemixtae cect 8399t, a member of the roseobacter clade isolated from a junction of fresh and ocean water in jeju island, south korea
publisher Elsevier
series Genomics Data
issn 2213-5960
publishDate 2016-03-01
description We report the draft genome sequence and annotation of Leisingera aquaemixtae CECT 8399T (DDBJ/EMBL/GenBank accession number CYSR00000000) which comprises 4,614,060 bp, 4313 protein coding genes, 54 tRNA coding genes and 7 rRNA coding genes. General findings of the annotated genome, such as pigment indigoidine operon, phenylacetate oxidation genes or predictable number of replicons, are commented in comparison to other Leisingera species. Average Nucleotide Identity between available genomes of type strains of species of Leisingera and Phaeobacter genera has been calculated to evaluate its current classification. Keywords: Rhodobacteraceae, Phaeobacter, Ectoine, Indigoidine, Phenylacetate degradation
url http://www.sciencedirect.com/science/article/pii/S2213596016300101
work_keys_str_mv AT lidiarodrigotorres draftgenomeofleisingeraaquaemixtaecect8399tamemberoftheroseobactercladeisolatedfromajunctionoffreshandoceanwaterinjejuislandsouthkorea
AT mariajpujalte draftgenomeofleisingeraaquaemixtaecect8399tamemberoftheroseobactercladeisolatedfromajunctionoffreshandoceanwaterinjejuislandsouthkorea
AT davidrarahal draftgenomeofleisingeraaquaemixtaecect8399tamemberoftheroseobactercladeisolatedfromajunctionoffreshandoceanwaterinjejuislandsouthkorea
_version_ 1724834698918625280

Similar Items