Explaining the emergence of complex networks through log-normal fitness in a Euclidean node similarity space

Abstract Networks of disparate phenomena—be it the global ecology, human social institutions, within the human brain, or in micro-scale protein interactions—exhibit broadly consistent architectural features. To explain this, we propose a new theory where link probability is modelled by a log-normal...

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Main Author: Keith Malcolm Smith
Format: Article
Language:English
Published: Nature Publishing Group 2021-01-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-021-81547-3
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spelling doaj-8806a638a86c4cd889e213b8d3f794382021-01-24T12:29:19ZengNature Publishing GroupScientific Reports2045-23222021-01-0111111410.1038/s41598-021-81547-3Explaining the emergence of complex networks through log-normal fitness in a Euclidean node similarity spaceKeith Malcolm Smith0Usher Institute, University of EdinburghAbstract Networks of disparate phenomena—be it the global ecology, human social institutions, within the human brain, or in micro-scale protein interactions—exhibit broadly consistent architectural features. To explain this, we propose a new theory where link probability is modelled by a log-normal node fitness (surface) factor and a latent Euclidean space-embedded node similarity (depth) factor. Building on recurring trends in the literature, the theory asserts that links arise due to individualistic as well as dyadic information and that important dyadic information making up the so-called depth factor is obscured by this essentially non-dyadic information making up the surface factor. Modelling based on this theory considerably outperforms popular power-law fitness and hyperbolic geometry explanations across 110 networks. Importantly, the degree distributions of the model resemble power-laws at small densities and log-normal distributions at larger densities, posing a reconciliatory solution to the long-standing debate on the nature and existence of scale-free networks. Validating this theory, a surface factor inversion approach on an economic world city network and an fMRI connectome results in considerably more geometrically aligned nearest neighbour networks, as is hypothesised to be the case for the depth factor. This establishes new foundations from which to understand, analyse, deconstruct and interpret network phenomena.https://doi.org/10.1038/s41598-021-81547-3
collection DOAJ
language English
format Article
sources DOAJ
author Keith Malcolm Smith
spellingShingle Keith Malcolm Smith
Explaining the emergence of complex networks through log-normal fitness in a Euclidean node similarity space
Scientific Reports
author_facet Keith Malcolm Smith
author_sort Keith Malcolm Smith
title Explaining the emergence of complex networks through log-normal fitness in a Euclidean node similarity space
title_short Explaining the emergence of complex networks through log-normal fitness in a Euclidean node similarity space
title_full Explaining the emergence of complex networks through log-normal fitness in a Euclidean node similarity space
title_fullStr Explaining the emergence of complex networks through log-normal fitness in a Euclidean node similarity space
title_full_unstemmed Explaining the emergence of complex networks through log-normal fitness in a Euclidean node similarity space
title_sort explaining the emergence of complex networks through log-normal fitness in a euclidean node similarity space
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2021-01-01
description Abstract Networks of disparate phenomena—be it the global ecology, human social institutions, within the human brain, or in micro-scale protein interactions—exhibit broadly consistent architectural features. To explain this, we propose a new theory where link probability is modelled by a log-normal node fitness (surface) factor and a latent Euclidean space-embedded node similarity (depth) factor. Building on recurring trends in the literature, the theory asserts that links arise due to individualistic as well as dyadic information and that important dyadic information making up the so-called depth factor is obscured by this essentially non-dyadic information making up the surface factor. Modelling based on this theory considerably outperforms popular power-law fitness and hyperbolic geometry explanations across 110 networks. Importantly, the degree distributions of the model resemble power-laws at small densities and log-normal distributions at larger densities, posing a reconciliatory solution to the long-standing debate on the nature and existence of scale-free networks. Validating this theory, a surface factor inversion approach on an economic world city network and an fMRI connectome results in considerably more geometrically aligned nearest neighbour networks, as is hypothesised to be the case for the depth factor. This establishes new foundations from which to understand, analyse, deconstruct and interpret network phenomena.
url https://doi.org/10.1038/s41598-021-81547-3
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