Non-Local SVD Denoising of MRI Based on Sparse Representations

Magnetic Resonance (MR) Imaging is a diagnostic technique that produces noisy images, which must be filtered before processing to prevent diagnostic errors. However, filtering the noise while keeping fine details is a difficult task. This paper presents a method, based on sparse representations and...

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Main Authors: Nallig Leal, Eduardo Zurek, Esmeide Leal
Format: Article
Language:English
Published: MDPI AG 2020-03-01
Series:Sensors
Subjects:
Online Access:https://www.mdpi.com/1424-8220/20/5/1536
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spelling doaj-86e4ad2ca73f42baa73e3a305717ff5f2020-11-25T02:25:05ZengMDPI AGSensors1424-82202020-03-01205153610.3390/s20051536s20051536Non-Local SVD Denoising of MRI Based on Sparse RepresentationsNallig Leal0Eduardo Zurek1Esmeide Leal2Department of Systems Engineering, Universidad del Norte, Barranquilla 080001, ColombiaDepartment of Systems Engineering, Universidad del Norte, Barranquilla 080001, ColombiaIndependent Consultant, Barranquilla 080001, ColombiaMagnetic Resonance (MR) Imaging is a diagnostic technique that produces noisy images, which must be filtered before processing to prevent diagnostic errors. However, filtering the noise while keeping fine details is a difficult task. This paper presents a method, based on sparse representations and singular value decomposition (SVD), for non-locally denoising MR images. The proposed method prevents blurring, artifacts, and residual noise. Our method is composed of three stages. The first stage divides the image into sub-volumes, to obtain its sparse representation, by using the KSVD algorithm. Then, the global influence of the dictionary atoms is computed to upgrade the dictionary and obtain a better reconstruction of the sub-volumes. In the second stage, based on the sparse representation, the noise-free sub-volume is estimated using a non-local approach and SVD. The noise-free voxel is reconstructed by aggregating the overlapped voxels according to the rarity of the sub-volumes it belongs, which is computed from the global influence of the atoms. The third stage repeats the process using a different sub-volume size for producing a new filtered image, which is averaged with the previously filtered images. The results provided show that our method outperforms several state-of-the-art methods in both simulated and real data.https://www.mdpi.com/1424-8220/20/5/1536dictionary learningimage denoisingmr imagesnon-local filteringsingular value decompositionsparse representations
collection DOAJ
language English
format Article
sources DOAJ
author Nallig Leal
Eduardo Zurek
Esmeide Leal
spellingShingle Nallig Leal
Eduardo Zurek
Esmeide Leal
Non-Local SVD Denoising of MRI Based on Sparse Representations
Sensors
dictionary learning
image denoising
mr images
non-local filtering
singular value decomposition
sparse representations
author_facet Nallig Leal
Eduardo Zurek
Esmeide Leal
author_sort Nallig Leal
title Non-Local SVD Denoising of MRI Based on Sparse Representations
title_short Non-Local SVD Denoising of MRI Based on Sparse Representations
title_full Non-Local SVD Denoising of MRI Based on Sparse Representations
title_fullStr Non-Local SVD Denoising of MRI Based on Sparse Representations
title_full_unstemmed Non-Local SVD Denoising of MRI Based on Sparse Representations
title_sort non-local svd denoising of mri based on sparse representations
publisher MDPI AG
series Sensors
issn 1424-8220
publishDate 2020-03-01
description Magnetic Resonance (MR) Imaging is a diagnostic technique that produces noisy images, which must be filtered before processing to prevent diagnostic errors. However, filtering the noise while keeping fine details is a difficult task. This paper presents a method, based on sparse representations and singular value decomposition (SVD), for non-locally denoising MR images. The proposed method prevents blurring, artifacts, and residual noise. Our method is composed of three stages. The first stage divides the image into sub-volumes, to obtain its sparse representation, by using the KSVD algorithm. Then, the global influence of the dictionary atoms is computed to upgrade the dictionary and obtain a better reconstruction of the sub-volumes. In the second stage, based on the sparse representation, the noise-free sub-volume is estimated using a non-local approach and SVD. The noise-free voxel is reconstructed by aggregating the overlapped voxels according to the rarity of the sub-volumes it belongs, which is computed from the global influence of the atoms. The third stage repeats the process using a different sub-volume size for producing a new filtered image, which is averaged with the previously filtered images. The results provided show that our method outperforms several state-of-the-art methods in both simulated and real data.
topic dictionary learning
image denoising
mr images
non-local filtering
singular value decomposition
sparse representations
url https://www.mdpi.com/1424-8220/20/5/1536
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