Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors.

Next generation bioreactors are being developed to generate multiple human cell-based tissue analogs within the same fluidic system, to better recapitulate the complexity and interconnection of human physiology [1, 2]. The effective development of these devices requires a solid understanding of thei...

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Main Authors: Laura Iannetti, Giovanna D'Urso, Gioacchino Conoscenti, Elena Cutrì, Rocky S Tuan, Manuela T Raimondi, Riccardo Gottardi, Paolo Zunino
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2016-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5036894?pdf=render
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spelling doaj-86566301b72244aaaaed3b96417a7e502020-11-25T01:48:04ZengPublic Library of Science (PLoS)PLoS ONE1932-62032016-01-01119e016277410.1371/journal.pone.0162774Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors.Laura IannettiGiovanna D'UrsoGioacchino ConoscentiElena CutrìRocky S TuanManuela T RaimondiRiccardo GottardiPaolo ZuninoNext generation bioreactors are being developed to generate multiple human cell-based tissue analogs within the same fluidic system, to better recapitulate the complexity and interconnection of human physiology [1, 2]. The effective development of these devices requires a solid understanding of their interconnected fluidics, to predict the transport of nutrients and waste through the constructs and improve the design accordingly. In this work, we focus on a specific model of bioreactor, with multiple input/outputs, aimed at generating osteochondral constructs, i.e., a biphasic construct in which one side is cartilaginous in nature, while the other is osseous. We next develop a general computational approach to model the microfluidics of a multi-chamber, interconnected system that may be applied to human-on-chip devices. This objective requires overcoming several challenges at the level of computational modeling. The main one consists of addressing the multi-physics nature of the problem that combines free flow in channels with hindered flow in porous media. Fluid dynamics is also coupled with advection-diffusion-reaction equations that model the transport of biomolecules throughout the system and their interaction with living tissues and C constructs. Ultimately, we aim at providing a predictive approach useful for the general organ-on-chip community. To this end, we have developed a lumped parameter approach that allows us to analyze the behavior of multi-unit bioreactor systems with modest computational effort, provided that the behavior of a single unit can be fully characterized.http://europepmc.org/articles/PMC5036894?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Laura Iannetti
Giovanna D'Urso
Gioacchino Conoscenti
Elena Cutrì
Rocky S Tuan
Manuela T Raimondi
Riccardo Gottardi
Paolo Zunino
spellingShingle Laura Iannetti
Giovanna D'Urso
Gioacchino Conoscenti
Elena Cutrì
Rocky S Tuan
Manuela T Raimondi
Riccardo Gottardi
Paolo Zunino
Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors.
PLoS ONE
author_facet Laura Iannetti
Giovanna D'Urso
Gioacchino Conoscenti
Elena Cutrì
Rocky S Tuan
Manuela T Raimondi
Riccardo Gottardi
Paolo Zunino
author_sort Laura Iannetti
title Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors.
title_short Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors.
title_full Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors.
title_fullStr Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors.
title_full_unstemmed Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors.
title_sort distributed and lumped parameter models for the characterization of high throughput bioreactors.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2016-01-01
description Next generation bioreactors are being developed to generate multiple human cell-based tissue analogs within the same fluidic system, to better recapitulate the complexity and interconnection of human physiology [1, 2]. The effective development of these devices requires a solid understanding of their interconnected fluidics, to predict the transport of nutrients and waste through the constructs and improve the design accordingly. In this work, we focus on a specific model of bioreactor, with multiple input/outputs, aimed at generating osteochondral constructs, i.e., a biphasic construct in which one side is cartilaginous in nature, while the other is osseous. We next develop a general computational approach to model the microfluidics of a multi-chamber, interconnected system that may be applied to human-on-chip devices. This objective requires overcoming several challenges at the level of computational modeling. The main one consists of addressing the multi-physics nature of the problem that combines free flow in channels with hindered flow in porous media. Fluid dynamics is also coupled with advection-diffusion-reaction equations that model the transport of biomolecules throughout the system and their interaction with living tissues and C constructs. Ultimately, we aim at providing a predictive approach useful for the general organ-on-chip community. To this end, we have developed a lumped parameter approach that allows us to analyze the behavior of multi-unit bioreactor systems with modest computational effort, provided that the behavior of a single unit can be fully characterized.
url http://europepmc.org/articles/PMC5036894?pdf=render
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