Twenty years of digital pathology: An overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archives

Almost 20 years have passed since the commercial introduction of whole-slide imaging (WSI) scanners. During this time, the creation of various WSI devices with the ability to digitize an entire glass slide has transformed the field of pathology. Parallel advances in computational technology and stor...

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Main Authors: Liron Pantanowitz, Ashish Sharma, Alexis B Carter, Tahsin Kurc, Alan Sussman, Joel Saltz
Format: Article
Language:English
Published: Wolters Kluwer Medknow Publications 2018-01-01
Series:Journal of Pathology Informatics
Subjects:
Online Access:http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2018;volume=9;issue=1;spage=40;epage=40;aulast=Pantanowitz
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spelling doaj-85b7de1d0a514eb78d2d89ce6362598a2020-11-25T00:20:35ZengWolters Kluwer Medknow PublicationsJournal of Pathology Informatics2153-35392153-35392018-01-0191404010.4103/jpi.jpi_69_18Twenty years of digital pathology: An overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archivesLiron PantanowitzAshish SharmaAlexis B CarterTahsin KurcAlan SussmanJoel SaltzAlmost 20 years have passed since the commercial introduction of whole-slide imaging (WSI) scanners. During this time, the creation of various WSI devices with the ability to digitize an entire glass slide has transformed the field of pathology. Parallel advances in computational technology and storage have permitted rapid processing of large-scale WSI datasets. This article provides an overview of important past and present efforts related to WSI. An account of how the virtual microscope evolved from the need to visualize and manage satellite data for earth science applications is provided. The article also discusses important milestones beginning from the first WSI scanner designed by Bacus to the Food and Drug Administration approval of the first digital pathology system for primary diagnosis in surgical pathology. As pathology laboratories commit to going fully digitalize, the need has emerged to include WSIs into an enterprise-level vendor-neutral archive (VNA). The different types of VNAs available are reviewed as well as how best to implement them and how pathology can benefit from participating in this effort. Differences between traditional image algorithms that extract pixel-, object-, and semantic-level features versus deep learning methods are highlighted. The need for large-scale data management, analysis, and visualization in computational pathology is also addressed.http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2018;volume=9;issue=1;spage=40;epage=40;aulast=PantanowitzComputational pathologydigital pathologyimage analysisinformaticsvendor neutral archivewhole-slide image
collection DOAJ
language English
format Article
sources DOAJ
author Liron Pantanowitz
Ashish Sharma
Alexis B Carter
Tahsin Kurc
Alan Sussman
Joel Saltz
spellingShingle Liron Pantanowitz
Ashish Sharma
Alexis B Carter
Tahsin Kurc
Alan Sussman
Joel Saltz
Twenty years of digital pathology: An overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archives
Journal of Pathology Informatics
Computational pathology
digital pathology
image analysis
informatics
vendor neutral archive
whole-slide image
author_facet Liron Pantanowitz
Ashish Sharma
Alexis B Carter
Tahsin Kurc
Alan Sussman
Joel Saltz
author_sort Liron Pantanowitz
title Twenty years of digital pathology: An overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archives
title_short Twenty years of digital pathology: An overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archives
title_full Twenty years of digital pathology: An overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archives
title_fullStr Twenty years of digital pathology: An overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archives
title_full_unstemmed Twenty years of digital pathology: An overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archives
title_sort twenty years of digital pathology: an overview of the road travelled, what is on the horizon, and the emergence of vendor-neutral archives
publisher Wolters Kluwer Medknow Publications
series Journal of Pathology Informatics
issn 2153-3539
2153-3539
publishDate 2018-01-01
description Almost 20 years have passed since the commercial introduction of whole-slide imaging (WSI) scanners. During this time, the creation of various WSI devices with the ability to digitize an entire glass slide has transformed the field of pathology. Parallel advances in computational technology and storage have permitted rapid processing of large-scale WSI datasets. This article provides an overview of important past and present efforts related to WSI. An account of how the virtual microscope evolved from the need to visualize and manage satellite data for earth science applications is provided. The article also discusses important milestones beginning from the first WSI scanner designed by Bacus to the Food and Drug Administration approval of the first digital pathology system for primary diagnosis in surgical pathology. As pathology laboratories commit to going fully digitalize, the need has emerged to include WSIs into an enterprise-level vendor-neutral archive (VNA). The different types of VNAs available are reviewed as well as how best to implement them and how pathology can benefit from participating in this effort. Differences between traditional image algorithms that extract pixel-, object-, and semantic-level features versus deep learning methods are highlighted. The need for large-scale data management, analysis, and visualization in computational pathology is also addressed.
topic Computational pathology
digital pathology
image analysis
informatics
vendor neutral archive
whole-slide image
url http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2018;volume=9;issue=1;spage=40;epage=40;aulast=Pantanowitz
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