Personalized Virus Load Curves for Acute Viral Infections

We introduce an explicit function that describes virus-load curves on a patient-specific level. This function is based on simple and intuitive model parameters. It allows virus load analysis of acute viral infections without solving a full virus load dynamic model. We validate our model on data from...

Full description

Bibliographic Details
Main Authors: Carlos Contreras, Jay M. Newby, Thomas Hillen
Format: Article
Language:English
Published: MDPI AG 2021-09-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/13/9/1815
id doaj-84d8f401e8bc4dc2b24bdcd59be1c7ec
record_format Article
spelling doaj-84d8f401e8bc4dc2b24bdcd59be1c7ec2021-09-26T01:37:34ZengMDPI AGViruses1999-49152021-09-01131815181510.3390/v13091815Personalized Virus Load Curves for Acute Viral InfectionsCarlos Contreras0Jay M. Newby1Thomas Hillen2Department of Mathematical and Statistical Sciences, University of Alberta, Edmonton, AB T6G 2R3, CanadaDepartment of Mathematical and Statistical Sciences, University of Alberta, Edmonton, AB T6G 2R3, CanadaDepartment of Mathematical and Statistical Sciences, University of Alberta, Edmonton, AB T6G 2R3, CanadaWe introduce an explicit function that describes virus-load curves on a patient-specific level. This function is based on simple and intuitive model parameters. It allows virus load analysis of acute viral infections without solving a full virus load dynamic model. We validate our model on data from mice influenza A, human rhinovirus data, human influenza A data, and monkey and human SARS-CoV-2 data. We find wide distributions for the model parameters, reflecting large variability in the disease outcomes between individuals. Further, we compare the virus load function to an established <i>target model</i> of virus dynamics, and we provide a new way to estimate the exponential growth rates of the corresponding infection phases. The virus load function, the target model, and the exponential approximations show excellent fits for the data considered. Our virus-load function offers a new way to analyze patient-specific virus load data, and it can be used as input for higher level models for the physiological effects of a virus infection, for models of tissue damage, and to estimate patient risks.https://www.mdpi.com/1999-4915/13/9/1815viral loadpatient specificmathematical modelingSARS-CoV-2
collection DOAJ
language English
format Article
sources DOAJ
author Carlos Contreras
Jay M. Newby
Thomas Hillen
spellingShingle Carlos Contreras
Jay M. Newby
Thomas Hillen
Personalized Virus Load Curves for Acute Viral Infections
Viruses
viral load
patient specific
mathematical modeling
SARS-CoV-2
author_facet Carlos Contreras
Jay M. Newby
Thomas Hillen
author_sort Carlos Contreras
title Personalized Virus Load Curves for Acute Viral Infections
title_short Personalized Virus Load Curves for Acute Viral Infections
title_full Personalized Virus Load Curves for Acute Viral Infections
title_fullStr Personalized Virus Load Curves for Acute Viral Infections
title_full_unstemmed Personalized Virus Load Curves for Acute Viral Infections
title_sort personalized virus load curves for acute viral infections
publisher MDPI AG
series Viruses
issn 1999-4915
publishDate 2021-09-01
description We introduce an explicit function that describes virus-load curves on a patient-specific level. This function is based on simple and intuitive model parameters. It allows virus load analysis of acute viral infections without solving a full virus load dynamic model. We validate our model on data from mice influenza A, human rhinovirus data, human influenza A data, and monkey and human SARS-CoV-2 data. We find wide distributions for the model parameters, reflecting large variability in the disease outcomes between individuals. Further, we compare the virus load function to an established <i>target model</i> of virus dynamics, and we provide a new way to estimate the exponential growth rates of the corresponding infection phases. The virus load function, the target model, and the exponential approximations show excellent fits for the data considered. Our virus-load function offers a new way to analyze patient-specific virus load data, and it can be used as input for higher level models for the physiological effects of a virus infection, for models of tissue damage, and to estimate patient risks.
topic viral load
patient specific
mathematical modeling
SARS-CoV-2
url https://www.mdpi.com/1999-4915/13/9/1815
work_keys_str_mv AT carloscontreras personalizedvirusloadcurvesforacuteviralinfections
AT jaymnewby personalizedvirusloadcurvesforacuteviralinfections
AT thomashillen personalizedvirusloadcurvesforacuteviralinfections
_version_ 1716868630007775232