Considerations of the Impacts of Cell-Specific Growth and Production Rate on Clone Selection—A Simulation Study

For the manufacturing of complex biopharmaceuticals using bioreactors with cultivated mammalian cells, high product concentration is an important objective. The phenotype of the cells in a reactor plays an important role. Are clonal cell populations showing high cell-specific growth rates more favor...

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Main Authors: Tanja Hernández Rodríguez, Sophie Morerod, Ralf Pörtner, Florian M. Wurm, Björn Frahm
Format: Article
Language:English
Published: MDPI AG 2021-05-01
Series:Processes
Subjects:
Online Access:https://www.mdpi.com/2227-9717/9/6/964
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spelling doaj-848d8201146945129c3f72dce70626362021-06-01T01:33:33ZengMDPI AGProcesses2227-97172021-05-01996496410.3390/pr9060964Considerations of the Impacts of Cell-Specific Growth and Production Rate on Clone Selection—A Simulation StudyTanja Hernández Rodríguez0Sophie Morerod1Ralf Pörtner2Florian M. Wurm3Björn Frahm4Biotechnology & Bioprocess Engineering, Ostwestfalen-Lippe University of Applied Sciences and Arts, 32657 Lemgo, GermanyExcellGene SA, 1870 Monthey, SwitzerlandInstitute for Bioprocess and Biosystems Engineering, Hamburg University of Technology, 21071 Hamburg, GermanyExcellGene SA, 1870 Monthey, SwitzerlandBiotechnology & Bioprocess Engineering, Ostwestfalen-Lippe University of Applied Sciences and Arts, 32657 Lemgo, GermanyFor the manufacturing of complex biopharmaceuticals using bioreactors with cultivated mammalian cells, high product concentration is an important objective. The phenotype of the cells in a reactor plays an important role. Are clonal cell populations showing high cell-specific growth rates more favorable than cell lines with higher cell-specific productivities or vice versa? Five clonal Chinese hamster ovary cell populations were analyzed based on the data of a 3-month-stability study. We adapted a mechanistic cell culture model to the experimental data of one such clonally derived cell population. Uncertainties and prior knowledge concerning model parameters were considered using Bayesian parameter estimations. This model was used then to define an inoculum train protocol. Based on this, we subsequently simulated the impacts of differences in growth rates (±10%) and production rates (±10% and ±50%) on the overall cultivation time, including making the inoculum train cultures; the final production phase, the volumetric titer in that bioreactor and the ratio of both, defined as overall process productivity. We showed thus unequivocally that growth rates have a higher impact (up to three times) on overall process productivity and for product output per year, whereas cells with higher productivity can potentially generate higher product concentrations in the production vessel.https://www.mdpi.com/2227-9717/9/6/964clonal cell populationphenotypic diversityinoculum trainuncertainty-basedcell culture modelbiopharmaceutical manufacturing
collection DOAJ
language English
format Article
sources DOAJ
author Tanja Hernández Rodríguez
Sophie Morerod
Ralf Pörtner
Florian M. Wurm
Björn Frahm
spellingShingle Tanja Hernández Rodríguez
Sophie Morerod
Ralf Pörtner
Florian M. Wurm
Björn Frahm
Considerations of the Impacts of Cell-Specific Growth and Production Rate on Clone Selection—A Simulation Study
Processes
clonal cell population
phenotypic diversity
inoculum train
uncertainty-based
cell culture model
biopharmaceutical manufacturing
author_facet Tanja Hernández Rodríguez
Sophie Morerod
Ralf Pörtner
Florian M. Wurm
Björn Frahm
author_sort Tanja Hernández Rodríguez
title Considerations of the Impacts of Cell-Specific Growth and Production Rate on Clone Selection—A Simulation Study
title_short Considerations of the Impacts of Cell-Specific Growth and Production Rate on Clone Selection—A Simulation Study
title_full Considerations of the Impacts of Cell-Specific Growth and Production Rate on Clone Selection—A Simulation Study
title_fullStr Considerations of the Impacts of Cell-Specific Growth and Production Rate on Clone Selection—A Simulation Study
title_full_unstemmed Considerations of the Impacts of Cell-Specific Growth and Production Rate on Clone Selection—A Simulation Study
title_sort considerations of the impacts of cell-specific growth and production rate on clone selection—a simulation study
publisher MDPI AG
series Processes
issn 2227-9717
publishDate 2021-05-01
description For the manufacturing of complex biopharmaceuticals using bioreactors with cultivated mammalian cells, high product concentration is an important objective. The phenotype of the cells in a reactor plays an important role. Are clonal cell populations showing high cell-specific growth rates more favorable than cell lines with higher cell-specific productivities or vice versa? Five clonal Chinese hamster ovary cell populations were analyzed based on the data of a 3-month-stability study. We adapted a mechanistic cell culture model to the experimental data of one such clonally derived cell population. Uncertainties and prior knowledge concerning model parameters were considered using Bayesian parameter estimations. This model was used then to define an inoculum train protocol. Based on this, we subsequently simulated the impacts of differences in growth rates (±10%) and production rates (±10% and ±50%) on the overall cultivation time, including making the inoculum train cultures; the final production phase, the volumetric titer in that bioreactor and the ratio of both, defined as overall process productivity. We showed thus unequivocally that growth rates have a higher impact (up to three times) on overall process productivity and for product output per year, whereas cells with higher productivity can potentially generate higher product concentrations in the production vessel.
topic clonal cell population
phenotypic diversity
inoculum train
uncertainty-based
cell culture model
biopharmaceutical manufacturing
url https://www.mdpi.com/2227-9717/9/6/964
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AT ralfportner considerationsoftheimpactsofcellspecificgrowthandproductionrateoncloneselectionasimulationstudy
AT florianmwurm considerationsoftheimpactsofcellspecificgrowthandproductionrateoncloneselectionasimulationstudy
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