Profiling the Functional Diversity of Termite Mound Soil Bacteria as Revealed by Shotgun Sequencing

• Main Authors: Ben Jesuorsemwen Enagbonma, Bukola Rhoda Aremu, Olubukola Oluranti Babalola
• Format: Article
• Language: English
• Published: MDPI AG 2019-08-01
• Series: Genes
• Subjects: metabolic potentials; metagenomics; novel genes; illumina sequencing; termitarium
• Online Access: https://www.mdpi.com/2073-4425/10/9/637

Profiling the metabolic processes performed by bacteria is vital both for understanding and for manipulating ecosystems for industrial or research purposes. In this study we aim to assess the bacterial functional diversity in termite mound soils with the assumption that significant differences will be observed in the functional diversity of bacteria between the termite mound soils and their surrounding soils and that each environment has a distinguishing metabolic profile. Here, metagenomic DNA extracted from termite mound soils and their corresponding surrounding soils, which are 10 m apart, were sequenced using a shotgun sequencing approach. Our results revealed that the relative abundances of 16 functional categories differed significantly between both habitats. The α diversity analysis indicated no significant difference in bacterial functional categories within the habitats while the β diversity showed that the bacterial functional categories varied significantly between the termite mound soils and the surrounding soil samples. The variations in soil physical and chemical properties existing between the two environments were held accountable for the differences in bacterial functional structure. With the high relative abundance of functional categories with unknown function reported in this study, this could signify the likelihood of getting novel genes from termite mound soils, which are needed for research and commercial applications.