Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac Arrhythmia
Permutation entropy (PE) is a robust quantity for measuring the complexity of time series. In the cardiac community it is predominantly used in the context of electrocardiogram (ECG) signal analysis for diagnoses and predictions with a major application found in heart rate variability parameters. In...
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doaj-839644392f114215b513a6bd2a0dbc2f2020-11-24T23:57:09ZengFrontiers Media S.A.Frontiers in Physics2296-424X2018-05-01610.3389/fphy.2018.00039351698Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac ArrhythmiaAlexander Schlemmer0Alexander Schlemmer1Sebastian Berg2Sebastian Berg3Thomas Lilienkamp4Thomas Lilienkamp5Stefan Luther6Stefan Luther7Stefan Luther8Stefan Luther9Stefan Luther10Ulrich Parlitz11Ulrich Parlitz12Ulrich Parlitz13Research Group Biomedical Physics, Max Planck Institute for Dynamics and Self-Organization, Göttingen, GermanyInstitute for Nonlinear Dynamics, Georg-August-Universität Göttingen, Göttingen, GermanyResearch Group Biomedical Physics, Max Planck Institute for Dynamics and Self-Organization, Göttingen, GermanyInstitute for Nonlinear Dynamics, Georg-August-Universität Göttingen, Göttingen, GermanyResearch Group Biomedical Physics, Max Planck Institute for Dynamics and Self-Organization, Göttingen, GermanyInstitute for Nonlinear Dynamics, Georg-August-Universität Göttingen, Göttingen, GermanyResearch Group Biomedical Physics, Max Planck Institute for Dynamics and Self-Organization, Göttingen, GermanyInstitute for Nonlinear Dynamics, Georg-August-Universität Göttingen, Göttingen, GermanyGerman Center for Cardiovascular Research (DZHK), Partner-Site Göttingen, Göttingen, GermanyInstitute of Pharmacology and Toxicology, University Medical Center Göttingen, Göttingen, GermanyDepartment of Physics and Bioengineering, Northeastern University, Boston, MA, United StatesResearch Group Biomedical Physics, Max Planck Institute for Dynamics and Self-Organization, Göttingen, GermanyInstitute for Nonlinear Dynamics, Georg-August-Universität Göttingen, Göttingen, GermanyGerman Center for Cardiovascular Research (DZHK), Partner-Site Göttingen, Göttingen, GermanyPermutation entropy (PE) is a robust quantity for measuring the complexity of time series. In the cardiac community it is predominantly used in the context of electrocardiogram (ECG) signal analysis for diagnoses and predictions with a major application found in heart rate variability parameters. In this article we are combining spatial and temporal PE to form a spatiotemporal PE that captures both, complexity of spatial structures and temporal complexity at the same time. We demonstrate that the spatiotemporal PE (STPE) quantifies complexity using two datasets from simulated cardiac arrhythmia and compare it to phase singularity analysis and spatial PE (SPE). These datasets simulate ventricular fibrillation (VF) on a two-dimensional and a three-dimensional medium using the Fenton-Karma model. We show that SPE and STPE are robust against noise and demonstrate its usefulness for extracting complexity features at different spatial scales.https://www.frontiersin.org/article/10.3389/fphy.2018.00039/fullpermutation entropycardiac arrhythmiaFenton-Karma simulationcomplexityexcitable mediaphase singularities |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Alexander Schlemmer Alexander Schlemmer Sebastian Berg Sebastian Berg Thomas Lilienkamp Thomas Lilienkamp Stefan Luther Stefan Luther Stefan Luther Stefan Luther Stefan Luther Ulrich Parlitz Ulrich Parlitz Ulrich Parlitz |
spellingShingle |
Alexander Schlemmer Alexander Schlemmer Sebastian Berg Sebastian Berg Thomas Lilienkamp Thomas Lilienkamp Stefan Luther Stefan Luther Stefan Luther Stefan Luther Stefan Luther Ulrich Parlitz Ulrich Parlitz Ulrich Parlitz Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac Arrhythmia Frontiers in Physics permutation entropy cardiac arrhythmia Fenton-Karma simulation complexity excitable media phase singularities |
author_facet |
Alexander Schlemmer Alexander Schlemmer Sebastian Berg Sebastian Berg Thomas Lilienkamp Thomas Lilienkamp Stefan Luther Stefan Luther Stefan Luther Stefan Luther Stefan Luther Ulrich Parlitz Ulrich Parlitz Ulrich Parlitz |
author_sort |
Alexander Schlemmer |
title |
Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac Arrhythmia |
title_short |
Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac Arrhythmia |
title_full |
Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac Arrhythmia |
title_fullStr |
Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac Arrhythmia |
title_full_unstemmed |
Spatiotemporal Permutation Entropy as a Measure for Complexity of Cardiac Arrhythmia |
title_sort |
spatiotemporal permutation entropy as a measure for complexity of cardiac arrhythmia |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Physics |
issn |
2296-424X |
publishDate |
2018-05-01 |
description |
Permutation entropy (PE) is a robust quantity for measuring the complexity of time series. In the cardiac community it is predominantly used in the context of electrocardiogram (ECG) signal analysis for diagnoses and predictions with a major application found in heart rate variability parameters. In this article we are combining spatial and temporal PE to form a spatiotemporal PE that captures both, complexity of spatial structures and temporal complexity at the same time. We demonstrate that the spatiotemporal PE (STPE) quantifies complexity using two datasets from simulated cardiac arrhythmia and compare it to phase singularity analysis and spatial PE (SPE). These datasets simulate ventricular fibrillation (VF) on a two-dimensional and a three-dimensional medium using the Fenton-Karma model. We show that SPE and STPE are robust against noise and demonstrate its usefulness for extracting complexity features at different spatial scales. |
topic |
permutation entropy cardiac arrhythmia Fenton-Karma simulation complexity excitable media phase singularities |
url |
https://www.frontiersin.org/article/10.3389/fphy.2018.00039/full |
work_keys_str_mv |
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