Ferrocene Orientation Determined Intramolecular Interactions Using Energy Decomposition Analysis
Two very different quantum mechanically based energy decomposition analyses (EDA) schemes are employed to study the dominant energy differences between the eclipsed and staggered ferrocene conformers. One is the extended transition state (ETS) based on the Amsterdam Density Functional (ADF) package...
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doaj-836787b0a373448b8343909b87a588e52020-11-25T00:19:42ZengMDPI AGMaterials1996-19442015-11-018117723773710.3390/ma8115419ma8115419Ferrocene Orientation Determined Intramolecular Interactions Using Energy Decomposition AnalysisFeng Wang0Shawkat Islam1Vladislav Vasilyev2Molecular Model Discovery Laboratory, Department of Chemistry and Biotechnology, Faculty of Science, Engineering and Technology, Swinburne University of Technology, Hawthorn, Melbourne 3122, AustraliaMolecular Model Discovery Laboratory, Department of Chemistry and Biotechnology, Faculty of Science, Engineering and Technology, Swinburne University of Technology, Hawthorn, Melbourne 3122, AustraliaNational Computational Infrastructure, Australian National University, Canberra 0200, AustraliaTwo very different quantum mechanically based energy decomposition analyses (EDA) schemes are employed to study the dominant energy differences between the eclipsed and staggered ferrocene conformers. One is the extended transition state (ETS) based on the Amsterdam Density Functional (ADF) package and the other is natural EDA (NEDA) based in the General Atomic and Molecular Electronic Structure System (GAMESS) package. It reveals that in addition to the model (theory and basis set), the fragmentation channels more significantly affect the interaction energy terms (ΔE) between the conformers. It is discovered that such an interaction energy can be absorbed into the pre-partitioned fragment channels so that to affect the interaction energies in a particular conformer of Fc. To avoid this, the present study employs a complete fragment channel—the fragments of ferrocene are individual neutral atoms. It therefore discovers that the major difference between the ferrocene conformers is due to the quantum mechanical Pauli repulsive energy and orbital attractive energy, leading to the eclipsed ferrocene the energy preferred structure. The NEDA scheme further indicates that the sum of attractive (negative) polarization (POL) and charge transfer (CL) energies prefers the eclipsed ferrocene. The repulsive (positive) deformation (DEF) energy, which is dominated by the cyclopentadienyle (Cp) rings, prefers the staggered ferrocene. Again, the cancellation results in a small energy residue in favour of the eclipsed ferrocene, in agreement with the ETS scheme. Further Natural Bond Orbital (NBO) analysis indicates that all NBO energies, total Lewis (no Fe) and lone pair (LP) deletion all prefer the eclipsed Fc conformer. The most significant energy preferring the eclipsed ferrocene without cancellation is the interactions between the donor lone pairs (LP) of the Fe atom and the acceptor antibond (BD*) NBOs of all C–C and C–H bonds in the ligand, LP(Fe)-BD*(C–C & C–H), which strongly stabilizes the eclipsed (D5h) conformation by −457.6 kcal·mol−1.http://www.mdpi.com/1996-1944/8/11/5419ferroceneeclipsed and staggered conformersenergy decomposition analysisnatural bond orbital schemeintramolecular interactionquantum mechanical models |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Feng Wang Shawkat Islam Vladislav Vasilyev |
spellingShingle |
Feng Wang Shawkat Islam Vladislav Vasilyev Ferrocene Orientation Determined Intramolecular Interactions Using Energy Decomposition Analysis Materials ferrocene eclipsed and staggered conformers energy decomposition analysis natural bond orbital scheme intramolecular interaction quantum mechanical models |
author_facet |
Feng Wang Shawkat Islam Vladislav Vasilyev |
author_sort |
Feng Wang |
title |
Ferrocene Orientation Determined Intramolecular Interactions Using Energy Decomposition Analysis |
title_short |
Ferrocene Orientation Determined Intramolecular Interactions Using Energy Decomposition Analysis |
title_full |
Ferrocene Orientation Determined Intramolecular Interactions Using Energy Decomposition Analysis |
title_fullStr |
Ferrocene Orientation Determined Intramolecular Interactions Using Energy Decomposition Analysis |
title_full_unstemmed |
Ferrocene Orientation Determined Intramolecular Interactions Using Energy Decomposition Analysis |
title_sort |
ferrocene orientation determined intramolecular interactions using energy decomposition analysis |
publisher |
MDPI AG |
series |
Materials |
issn |
1996-1944 |
publishDate |
2015-11-01 |
description |
Two very different quantum mechanically based energy decomposition analyses (EDA) schemes are employed to study the dominant energy differences between the eclipsed and staggered ferrocene conformers. One is the extended transition state (ETS) based on the Amsterdam Density Functional (ADF) package and the other is natural EDA (NEDA) based in the General Atomic and Molecular Electronic Structure System (GAMESS) package. It reveals that in addition to the model (theory and basis set), the fragmentation channels more significantly affect the interaction energy terms (ΔE) between the conformers. It is discovered that such an interaction energy can be absorbed into the pre-partitioned fragment channels so that to affect the interaction energies in a particular conformer of Fc. To avoid this, the present study employs a complete fragment channel—the fragments of ferrocene are individual neutral atoms. It therefore discovers that the major difference between the ferrocene conformers is due to the quantum mechanical Pauli repulsive energy and orbital attractive energy, leading to the eclipsed ferrocene the energy preferred structure. The NEDA scheme further indicates that the sum of attractive (negative) polarization (POL) and charge transfer (CL) energies prefers the eclipsed ferrocene. The repulsive (positive) deformation (DEF) energy, which is dominated by the cyclopentadienyle (Cp) rings, prefers the staggered ferrocene. Again, the cancellation results in a small energy residue in favour of the eclipsed ferrocene, in agreement with the ETS scheme. Further Natural Bond Orbital (NBO) analysis indicates that all NBO energies, total Lewis (no Fe) and lone pair (LP) deletion all prefer the eclipsed Fc conformer. The most significant energy preferring the eclipsed ferrocene without cancellation is the interactions between the donor lone pairs (LP) of the Fe atom and the acceptor antibond (BD*) NBOs of all C–C and C–H bonds in the ligand, LP(Fe)-BD*(C–C & C–H), which strongly stabilizes the eclipsed (D5h) conformation by −457.6 kcal·mol−1. |
topic |
ferrocene eclipsed and staggered conformers energy decomposition analysis natural bond orbital scheme intramolecular interaction quantum mechanical models |
url |
http://www.mdpi.com/1996-1944/8/11/5419 |
work_keys_str_mv |
AT fengwang ferroceneorientationdeterminedintramolecularinteractionsusingenergydecompositionanalysis AT shawkatislam ferroceneorientationdeterminedintramolecularinteractionsusingenergydecompositionanalysis AT vladislavvasilyev ferroceneorientationdeterminedintramolecularinteractionsusingenergydecompositionanalysis |
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