Composition and Activity of N<sub>2</sub>-Fixing Microorganisms in Mangrove Forest Soils

Mangrove forests are considered to be a highly productive ecosystem, but they are also generally nitrogen (N)-limited. Thus, soil N<sub>2</sub> fixation can be important for the stability of both mangrove ecosystem functions and upland N supply. This study evaluates the N<sub>2<...

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Main Authors: Yo-Jin Shiau, Yu-Te Lin, Rita S. W. Yam, Ed-Haun Chang, Jhe-Ming Wu, Tsu-Hsuan Hsu, Chih-Yu Chiu
Format: Article
Language:English
Published: MDPI AG 2021-06-01
Series:Forests
Subjects:
Online Access:https://www.mdpi.com/1999-4907/12/7/822
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spelling doaj-834cca5d2b00441f8387cfd3a017c16c2021-07-23T13:40:59ZengMDPI AGForests1999-49072021-06-011282282210.3390/f12070822Composition and Activity of N<sub>2</sub>-Fixing Microorganisms in Mangrove Forest SoilsYo-Jin Shiau0Yu-Te Lin1Rita S. W. Yam2Ed-Haun Chang3Jhe-Ming Wu4Tsu-Hsuan Hsu5Chih-Yu Chiu6Department of Bioenvironmental Systems Engineering, National Taiwan University, Taipei 106, TaiwanBiodiversity Research Center, Academia Sinica, Taipei 11529, TaiwanDepartment of Bioenvironmental Systems Engineering, National Taiwan University, Taipei 106, TaiwanMacKay Junior College of Medicine, Nursing and Management, Beitou, Taipei 112, TaiwanBiodiversity Research Center, Academia Sinica, Taipei 11529, TaiwanBiodiversity Research Center, Academia Sinica, Taipei 11529, TaiwanBiodiversity Research Center, Academia Sinica, Taipei 11529, TaiwanMangrove forests are considered to be a highly productive ecosystem, but they are also generally nitrogen (N)-limited. Thus, soil N<sub>2</sub> fixation can be important for the stability of both mangrove ecosystem functions and upland N supply. This study evaluates the N<sub>2</sub> fixation activity and composition of relevant microorganisms in two coastal mangrove forests—the Guandu mangrove in an upstream estuary and the Bali mangrove in a downstream estuary—using the acetylene reduction method, real-time polymerase chain reaction, and next-generation sequencing. The results demonstrated that ambient nitrogenase activity was higher in downstream mangrove forests (13.2–15.6 nmol h<sup>−1</sup> g<sup>−1</sup> soil) than in upstream mangrove forests (0.2–1.4 nmol h<sup>−1</sup> g<sup>−1</sup> soil). However, both the maximum potential nitrogenase activity and nitrogenase gene (<i>nifH</i> gene) copy number were found to be higher in the upstream than in the downstream mangrove forests, implying that the nitrogenase activity and diazotrophic abundance may not necessarily be positively correlated. In addition, amended MoO<sub>4</sub> (which inhibits the activity of sulfate-reducing bacteria in N<sub>2</sub>-fixation) yielded low nitrogenase activity, and sulfate-reducing bacteria made up 20–50% of the relative diazotrophic abundance in the mangrove forests, indicating that these bacteria might be the major active diazotrophs in this environment.https://www.mdpi.com/1999-4907/12/7/822mangroveN<sub>2</sub> fixationdiazotrophssulfate reducing bacteria<i>nifH</i> geneacetylene reduction
collection DOAJ
language English
format Article
sources DOAJ
author Yo-Jin Shiau
Yu-Te Lin
Rita S. W. Yam
Ed-Haun Chang
Jhe-Ming Wu
Tsu-Hsuan Hsu
Chih-Yu Chiu
spellingShingle Yo-Jin Shiau
Yu-Te Lin
Rita S. W. Yam
Ed-Haun Chang
Jhe-Ming Wu
Tsu-Hsuan Hsu
Chih-Yu Chiu
Composition and Activity of N<sub>2</sub>-Fixing Microorganisms in Mangrove Forest Soils
Forests
mangrove
N<sub>2</sub> fixation
diazotrophs
sulfate reducing bacteria
<i>nifH</i> gene
acetylene reduction
author_facet Yo-Jin Shiau
Yu-Te Lin
Rita S. W. Yam
Ed-Haun Chang
Jhe-Ming Wu
Tsu-Hsuan Hsu
Chih-Yu Chiu
author_sort Yo-Jin Shiau
title Composition and Activity of N<sub>2</sub>-Fixing Microorganisms in Mangrove Forest Soils
title_short Composition and Activity of N<sub>2</sub>-Fixing Microorganisms in Mangrove Forest Soils
title_full Composition and Activity of N<sub>2</sub>-Fixing Microorganisms in Mangrove Forest Soils
title_fullStr Composition and Activity of N<sub>2</sub>-Fixing Microorganisms in Mangrove Forest Soils
title_full_unstemmed Composition and Activity of N<sub>2</sub>-Fixing Microorganisms in Mangrove Forest Soils
title_sort composition and activity of n<sub>2</sub>-fixing microorganisms in mangrove forest soils
publisher MDPI AG
series Forests
issn 1999-4907
publishDate 2021-06-01
description Mangrove forests are considered to be a highly productive ecosystem, but they are also generally nitrogen (N)-limited. Thus, soil N<sub>2</sub> fixation can be important for the stability of both mangrove ecosystem functions and upland N supply. This study evaluates the N<sub>2</sub> fixation activity and composition of relevant microorganisms in two coastal mangrove forests—the Guandu mangrove in an upstream estuary and the Bali mangrove in a downstream estuary—using the acetylene reduction method, real-time polymerase chain reaction, and next-generation sequencing. The results demonstrated that ambient nitrogenase activity was higher in downstream mangrove forests (13.2–15.6 nmol h<sup>−1</sup> g<sup>−1</sup> soil) than in upstream mangrove forests (0.2–1.4 nmol h<sup>−1</sup> g<sup>−1</sup> soil). However, both the maximum potential nitrogenase activity and nitrogenase gene (<i>nifH</i> gene) copy number were found to be higher in the upstream than in the downstream mangrove forests, implying that the nitrogenase activity and diazotrophic abundance may not necessarily be positively correlated. In addition, amended MoO<sub>4</sub> (which inhibits the activity of sulfate-reducing bacteria in N<sub>2</sub>-fixation) yielded low nitrogenase activity, and sulfate-reducing bacteria made up 20–50% of the relative diazotrophic abundance in the mangrove forests, indicating that these bacteria might be the major active diazotrophs in this environment.
topic mangrove
N<sub>2</sub> fixation
diazotrophs
sulfate reducing bacteria
<i>nifH</i> gene
acetylene reduction
url https://www.mdpi.com/1999-4907/12/7/822
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