A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis

The erythroid Krüppel-like factor EKLF/KLF1 is a hematopoietic transcription factor binding to the CACCC DNA motif and participating in the regulation of erythroid differentiation. With combined use of microarray-based gene expression profiling and the promoter-based ChIP-chip assay of E14.5 fetal l...

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Main Authors: Chun-Hao Hung, Tung-Liang Lee, Anna Yu-Szu Huang, Kang-Chung Yang, Yu-Chiau Shyu, Shau-Ching Wen, Mu-Jie Lu, Shinsheng Yuan, Che-Kun James Shen
Format: Article
Language:English
Published: MDPI AG 2021-07-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/22/15/8024
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spelling doaj-832d7ac67c494d698dd59fc80cae4f2c2021-08-06T15:25:09ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-07-01228024802410.3390/ijms22158024A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the ErythropoiesisChun-Hao Hung0Tung-Liang Lee1Anna Yu-Szu Huang2Kang-Chung Yang3Yu-Chiau Shyu4Shau-Ching Wen5Mu-Jie Lu6Shinsheng Yuan7Che-Kun James Shen8Institute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanGenome and Systems Biology Degree Program, College of Life Science, National Taiwan University, Taipei 10617, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Statistical Science, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanThe erythroid Krüppel-like factor EKLF/KLF1 is a hematopoietic transcription factor binding to the CACCC DNA motif and participating in the regulation of erythroid differentiation. With combined use of microarray-based gene expression profiling and the promoter-based ChIP-chip assay of E14.5 fetal liver cells from wild type (WT) and EKLF-knockout (<i>Eklf</i><sup>−/−</sup>) mouse embryos, we identified the pathways and direct target genes activated or repressed by EKLF. This genome-wide study together with the molecular/cellular analysis of the mouse erythroleukemic cells (MEL) indicate that among the downstream direct target genes of EKLF is <i>Tal1</i>/<i>Scl</i>. <i>Tal1</i>/<i>Scl</i> encodes another DNA-binding hematopoietic transcription factor TAL1/SCL, known to be an <i>Eklf</i> activator and essential for definitive erythroid differentiation. Further identification of the authentic Tal gene promoter in combination with the in vivo genomic footprinting approach and DNA reporter assay demonstrate that EKLF activates the Tal gene through binding to a specific CACCC motif located in its promoter. These data establish the existence of a previously unknow positive regulatory feedback loop between two DNA-binding hematopoietic transcription factors, which sustains mammalian erythropoiesis.https://www.mdpi.com/1422-0067/22/15/8024erythroid differentiationEKLF/KLF1gene knockoutTAL1/SCLglobal gene expression profilingdirect target genes
collection DOAJ
language English
format Article
sources DOAJ
author Chun-Hao Hung
Tung-Liang Lee
Anna Yu-Szu Huang
Kang-Chung Yang
Yu-Chiau Shyu
Shau-Ching Wen
Mu-Jie Lu
Shinsheng Yuan
Che-Kun James Shen
spellingShingle Chun-Hao Hung
Tung-Liang Lee
Anna Yu-Szu Huang
Kang-Chung Yang
Yu-Chiau Shyu
Shau-Ching Wen
Mu-Jie Lu
Shinsheng Yuan
Che-Kun James Shen
A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis
International Journal of Molecular Sciences
erythroid differentiation
EKLF/KLF1
gene knockout
TAL1/SCL
global gene expression profiling
direct target genes
author_facet Chun-Hao Hung
Tung-Liang Lee
Anna Yu-Szu Huang
Kang-Chung Yang
Yu-Chiau Shyu
Shau-Ching Wen
Mu-Jie Lu
Shinsheng Yuan
Che-Kun James Shen
author_sort Chun-Hao Hung
title A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis
title_short A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis
title_full A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis
title_fullStr A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis
title_full_unstemmed A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis
title_sort positive regulatory feedback loop between eklf/klf1 and tal1/scl sustaining the erythropoiesis
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1661-6596
1422-0067
publishDate 2021-07-01
description The erythroid Krüppel-like factor EKLF/KLF1 is a hematopoietic transcription factor binding to the CACCC DNA motif and participating in the regulation of erythroid differentiation. With combined use of microarray-based gene expression profiling and the promoter-based ChIP-chip assay of E14.5 fetal liver cells from wild type (WT) and EKLF-knockout (<i>Eklf</i><sup>−/−</sup>) mouse embryos, we identified the pathways and direct target genes activated or repressed by EKLF. This genome-wide study together with the molecular/cellular analysis of the mouse erythroleukemic cells (MEL) indicate that among the downstream direct target genes of EKLF is <i>Tal1</i>/<i>Scl</i>. <i>Tal1</i>/<i>Scl</i> encodes another DNA-binding hematopoietic transcription factor TAL1/SCL, known to be an <i>Eklf</i> activator and essential for definitive erythroid differentiation. Further identification of the authentic Tal gene promoter in combination with the in vivo genomic footprinting approach and DNA reporter assay demonstrate that EKLF activates the Tal gene through binding to a specific CACCC motif located in its promoter. These data establish the existence of a previously unknow positive regulatory feedback loop between two DNA-binding hematopoietic transcription factors, which sustains mammalian erythropoiesis.
topic erythroid differentiation
EKLF/KLF1
gene knockout
TAL1/SCL
global gene expression profiling
direct target genes
url https://www.mdpi.com/1422-0067/22/15/8024
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