A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis
The erythroid Krüppel-like factor EKLF/KLF1 is a hematopoietic transcription factor binding to the CACCC DNA motif and participating in the regulation of erythroid differentiation. With combined use of microarray-based gene expression profiling and the promoter-based ChIP-chip assay of E14.5 fetal l...
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doaj-832d7ac67c494d698dd59fc80cae4f2c2021-08-06T15:25:09ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-07-01228024802410.3390/ijms22158024A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the ErythropoiesisChun-Hao Hung0Tung-Liang Lee1Anna Yu-Szu Huang2Kang-Chung Yang3Yu-Chiau Shyu4Shau-Ching Wen5Mu-Jie Lu6Shinsheng Yuan7Che-Kun James Shen8Institute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanGenome and Systems Biology Degree Program, College of Life Science, National Taiwan University, Taipei 10617, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanInstitute of Statistical Science, Academia Sinica, Taipei 11529, TaiwanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, TaiwanThe erythroid Krüppel-like factor EKLF/KLF1 is a hematopoietic transcription factor binding to the CACCC DNA motif and participating in the regulation of erythroid differentiation. With combined use of microarray-based gene expression profiling and the promoter-based ChIP-chip assay of E14.5 fetal liver cells from wild type (WT) and EKLF-knockout (<i>Eklf</i><sup>−/−</sup>) mouse embryos, we identified the pathways and direct target genes activated or repressed by EKLF. This genome-wide study together with the molecular/cellular analysis of the mouse erythroleukemic cells (MEL) indicate that among the downstream direct target genes of EKLF is <i>Tal1</i>/<i>Scl</i>. <i>Tal1</i>/<i>Scl</i> encodes another DNA-binding hematopoietic transcription factor TAL1/SCL, known to be an <i>Eklf</i> activator and essential for definitive erythroid differentiation. Further identification of the authentic Tal gene promoter in combination with the in vivo genomic footprinting approach and DNA reporter assay demonstrate that EKLF activates the Tal gene through binding to a specific CACCC motif located in its promoter. These data establish the existence of a previously unknow positive regulatory feedback loop between two DNA-binding hematopoietic transcription factors, which sustains mammalian erythropoiesis.https://www.mdpi.com/1422-0067/22/15/8024erythroid differentiationEKLF/KLF1gene knockoutTAL1/SCLglobal gene expression profilingdirect target genes |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Chun-Hao Hung Tung-Liang Lee Anna Yu-Szu Huang Kang-Chung Yang Yu-Chiau Shyu Shau-Ching Wen Mu-Jie Lu Shinsheng Yuan Che-Kun James Shen |
spellingShingle |
Chun-Hao Hung Tung-Liang Lee Anna Yu-Szu Huang Kang-Chung Yang Yu-Chiau Shyu Shau-Ching Wen Mu-Jie Lu Shinsheng Yuan Che-Kun James Shen A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis International Journal of Molecular Sciences erythroid differentiation EKLF/KLF1 gene knockout TAL1/SCL global gene expression profiling direct target genes |
author_facet |
Chun-Hao Hung Tung-Liang Lee Anna Yu-Szu Huang Kang-Chung Yang Yu-Chiau Shyu Shau-Ching Wen Mu-Jie Lu Shinsheng Yuan Che-Kun James Shen |
author_sort |
Chun-Hao Hung |
title |
A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis |
title_short |
A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis |
title_full |
A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis |
title_fullStr |
A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis |
title_full_unstemmed |
A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL Sustaining the Erythropoiesis |
title_sort |
positive regulatory feedback loop between eklf/klf1 and tal1/scl sustaining the erythropoiesis |
publisher |
MDPI AG |
series |
International Journal of Molecular Sciences |
issn |
1661-6596 1422-0067 |
publishDate |
2021-07-01 |
description |
The erythroid Krüppel-like factor EKLF/KLF1 is a hematopoietic transcription factor binding to the CACCC DNA motif and participating in the regulation of erythroid differentiation. With combined use of microarray-based gene expression profiling and the promoter-based ChIP-chip assay of E14.5 fetal liver cells from wild type (WT) and EKLF-knockout (<i>Eklf</i><sup>−/−</sup>) mouse embryos, we identified the pathways and direct target genes activated or repressed by EKLF. This genome-wide study together with the molecular/cellular analysis of the mouse erythroleukemic cells (MEL) indicate that among the downstream direct target genes of EKLF is <i>Tal1</i>/<i>Scl</i>. <i>Tal1</i>/<i>Scl</i> encodes another DNA-binding hematopoietic transcription factor TAL1/SCL, known to be an <i>Eklf</i> activator and essential for definitive erythroid differentiation. Further identification of the authentic Tal gene promoter in combination with the in vivo genomic footprinting approach and DNA reporter assay demonstrate that EKLF activates the Tal gene through binding to a specific CACCC motif located in its promoter. These data establish the existence of a previously unknow positive regulatory feedback loop between two DNA-binding hematopoietic transcription factors, which sustains mammalian erythropoiesis. |
topic |
erythroid differentiation EKLF/KLF1 gene knockout TAL1/SCL global gene expression profiling direct target genes |
url |
https://www.mdpi.com/1422-0067/22/15/8024 |
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