Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero Mexico
Palm wine is obtained by fermentation of palm tree sap. In the Pacific coast of Mexico, palm wine is called Tuba and it is consumed as a traditional fermented beverage. Tuba has empirical applications such as an auxiliary in gastrointestinal diseases and a good source of nutrients. In the present st...
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doaj-82701a68eb9242d38a407d5a435c9d712020-11-24T21:20:54ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2019-03-011010.3389/fmicb.2019.00531441468Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero MexicoFernando Astudillo-Melgar0Fernando Astudillo-Melgar1Adrián Ochoa-Leyva2José Utrilla3Gerardo Huerta-Beristain4Laboratorio de Investigación en Biotecnología, Universidad Autónoma de Guerrero, Chilpancingo, MexicoPrograma de Biología de Sistemas y Biología Sintética, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, MexicoDepartamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, MexicoPrograma de Biología de Sistemas y Biología Sintética, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, MexicoLaboratorio de Investigación en Biotecnología, Universidad Autónoma de Guerrero, Chilpancingo, MexicoPalm wine is obtained by fermentation of palm tree sap. In the Pacific coast of Mexico, palm wine is called Tuba and it is consumed as a traditional fermented beverage. Tuba has empirical applications such as an auxiliary in gastrointestinal diseases and a good source of nutrients. In the present study, a next-generation sequencing of the V3–V4 regions of the 16S rRNA gene was employed to analyze bacterial diversity and population dynamics during the fermentation process of Tuba, both in laboratory controlled conditions and in commercial samples from local vendors. Taxonomic identification showed that Fructobacillus was the main genus in all the samples, following by Leuconostoc, Gluconacetobacter, Sphingomonas, and Vibrio. Alpha diversity analysis demonstrated variability between all the samples. Beta diversity clustered the bacterial population according to the collection origin of the sample. Metabolic functional profile inference showed that the members of the bacterial communities may present the vitamin, antibiotic and antioxidant biosynthesis genes. Additionally, we further investigated the correlation between the predominant genera and some composition parameters of this beverage. This study provides the basis of the bacterial community composition and functionality of the fermented beverage.https://www.frontiersin.org/article/10.3389/fmicb.2019.00531/fullTubafermented beveragebacterial diversityfunctionalitymassive sequencing |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Fernando Astudillo-Melgar Fernando Astudillo-Melgar Adrián Ochoa-Leyva José Utrilla Gerardo Huerta-Beristain |
spellingShingle |
Fernando Astudillo-Melgar Fernando Astudillo-Melgar Adrián Ochoa-Leyva José Utrilla Gerardo Huerta-Beristain Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero Mexico Frontiers in Microbiology Tuba fermented beverage bacterial diversity functionality massive sequencing |
author_facet |
Fernando Astudillo-Melgar Fernando Astudillo-Melgar Adrián Ochoa-Leyva José Utrilla Gerardo Huerta-Beristain |
author_sort |
Fernando Astudillo-Melgar |
title |
Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero Mexico |
title_short |
Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero Mexico |
title_full |
Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero Mexico |
title_fullStr |
Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero Mexico |
title_full_unstemmed |
Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero Mexico |
title_sort |
bacterial diversity and population dynamics during the fermentation of palm wine from guerrero mexico |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Microbiology |
issn |
1664-302X |
publishDate |
2019-03-01 |
description |
Palm wine is obtained by fermentation of palm tree sap. In the Pacific coast of Mexico, palm wine is called Tuba and it is consumed as a traditional fermented beverage. Tuba has empirical applications such as an auxiliary in gastrointestinal diseases and a good source of nutrients. In the present study, a next-generation sequencing of the V3–V4 regions of the 16S rRNA gene was employed to analyze bacterial diversity and population dynamics during the fermentation process of Tuba, both in laboratory controlled conditions and in commercial samples from local vendors. Taxonomic identification showed that Fructobacillus was the main genus in all the samples, following by Leuconostoc, Gluconacetobacter, Sphingomonas, and Vibrio. Alpha diversity analysis demonstrated variability between all the samples. Beta diversity clustered the bacterial population according to the collection origin of the sample. Metabolic functional profile inference showed that the members of the bacterial communities may present the vitamin, antibiotic and antioxidant biosynthesis genes. Additionally, we further investigated the correlation between the predominant genera and some composition parameters of this beverage. This study provides the basis of the bacterial community composition and functionality of the fermented beverage. |
topic |
Tuba fermented beverage bacterial diversity functionality massive sequencing |
url |
https://www.frontiersin.org/article/10.3389/fmicb.2019.00531/full |
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