MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing

Biomimetic binders and catalysts have been generated in order to substitute the biological pendants in separation techniques and bioanalysis. The two major approaches use either “evolution in the test tube” of nucleotides for the preparation of aptamers or total chemical synthesis for molecularly im...

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Main Authors: Marcus Menger, Aysu Yarman, Júlia Erdőssy, Huseyin Bekir Yildiz, Róbert E. Gyurcsányi, Frieder W. Scheller
Format: Article
Language:English
Published: MDPI AG 2016-07-01
Series:Biosensors
Subjects:
Online Access:http://www.mdpi.com/2079-6374/6/3/35
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spelling doaj-824d27ed4ee54e65911e81fd66a3cf592020-11-24T22:47:58ZengMDPI AGBiosensors2079-63742016-07-01633510.3390/bios6030035bios6030035MIPs and Aptamers for Recognition of Proteins in Biomimetic SensingMarcus Menger0Aysu Yarman1Júlia Erdőssy2Huseyin Bekir Yildiz3Róbert E. Gyurcsányi4Frieder W. Scheller5Fraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalytics and Bioprocesses (IZI-BB), Am Mühlenberg 13, Potsdam D-14476, GermanyInstitute of Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Strasse 25-26, Potsdam D-14476, GermanyMTA-BME “Lendület” Chemical Nanosensors Research Group, Department of Inorganic and Analytical Chemistry, Budapest University of Technology and Economics, Szent Gellért tér 4, Budapest H-1111, HungaryDepartment of Materials Science and Nanotechnology Engineering, KTO Karatay University, Konya 42020, TurkeyMTA-BME “Lendület” Chemical Nanosensors Research Group, Department of Inorganic and Analytical Chemistry, Budapest University of Technology and Economics, Szent Gellért tér 4, Budapest H-1111, HungaryFraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalytics and Bioprocesses (IZI-BB), Am Mühlenberg 13, Potsdam D-14476, GermanyBiomimetic binders and catalysts have been generated in order to substitute the biological pendants in separation techniques and bioanalysis. The two major approaches use either “evolution in the test tube” of nucleotides for the preparation of aptamers or total chemical synthesis for molecularly imprinted polymers (MIPs). The reproducible production of aptamers is a clear advantage, whilst the preparation of MIPs typically leads to a population of polymers with different binding sites. The realization of binding sites in the total bulk of the MIPs results in a higher binding capacity, however, on the expense of the accessibility and exchange rate. Furthermore, the readout of the bound analyte is easier for aptamers since the integration of signal generating labels is well established. On the other hand, the overall negative charge of the nucleotides makes aptamers prone to non-specific adsorption of positively charged constituents of the sample and the “biological” degradation of non-modified aptamers and ionic strength-dependent changes of conformation may be challenging in some application.http://www.mdpi.com/2079-6374/6/3/35biomimetic recognition elementsaptamersmolecularly imprinted polymerschemical sensorsaptasensorsin vitro selectionSELEX
collection DOAJ
language English
format Article
sources DOAJ
author Marcus Menger
Aysu Yarman
Júlia Erdőssy
Huseyin Bekir Yildiz
Róbert E. Gyurcsányi
Frieder W. Scheller
spellingShingle Marcus Menger
Aysu Yarman
Júlia Erdőssy
Huseyin Bekir Yildiz
Róbert E. Gyurcsányi
Frieder W. Scheller
MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing
Biosensors
biomimetic recognition elements
aptamers
molecularly imprinted polymers
chemical sensors
aptasensors
in vitro selection
SELEX
author_facet Marcus Menger
Aysu Yarman
Júlia Erdőssy
Huseyin Bekir Yildiz
Róbert E. Gyurcsányi
Frieder W. Scheller
author_sort Marcus Menger
title MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing
title_short MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing
title_full MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing
title_fullStr MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing
title_full_unstemmed MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing
title_sort mips and aptamers for recognition of proteins in biomimetic sensing
publisher MDPI AG
series Biosensors
issn 2079-6374
publishDate 2016-07-01
description Biomimetic binders and catalysts have been generated in order to substitute the biological pendants in separation techniques and bioanalysis. The two major approaches use either “evolution in the test tube” of nucleotides for the preparation of aptamers or total chemical synthesis for molecularly imprinted polymers (MIPs). The reproducible production of aptamers is a clear advantage, whilst the preparation of MIPs typically leads to a population of polymers with different binding sites. The realization of binding sites in the total bulk of the MIPs results in a higher binding capacity, however, on the expense of the accessibility and exchange rate. Furthermore, the readout of the bound analyte is easier for aptamers since the integration of signal generating labels is well established. On the other hand, the overall negative charge of the nucleotides makes aptamers prone to non-specific adsorption of positively charged constituents of the sample and the “biological” degradation of non-modified aptamers and ionic strength-dependent changes of conformation may be challenging in some application.
topic biomimetic recognition elements
aptamers
molecularly imprinted polymers
chemical sensors
aptasensors
in vitro selection
SELEX
url http://www.mdpi.com/2079-6374/6/3/35
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