MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing
Biomimetic binders and catalysts have been generated in order to substitute the biological pendants in separation techniques and bioanalysis. The two major approaches use either “evolution in the test tube” of nucleotides for the preparation of aptamers or total chemical synthesis for molecularly im...
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doaj-824d27ed4ee54e65911e81fd66a3cf592020-11-24T22:47:58ZengMDPI AGBiosensors2079-63742016-07-01633510.3390/bios6030035bios6030035MIPs and Aptamers for Recognition of Proteins in Biomimetic SensingMarcus Menger0Aysu Yarman1Júlia Erdőssy2Huseyin Bekir Yildiz3Róbert E. Gyurcsányi4Frieder W. Scheller5Fraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalytics and Bioprocesses (IZI-BB), Am Mühlenberg 13, Potsdam D-14476, GermanyInstitute of Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Strasse 25-26, Potsdam D-14476, GermanyMTA-BME “Lendület” Chemical Nanosensors Research Group, Department of Inorganic and Analytical Chemistry, Budapest University of Technology and Economics, Szent Gellért tér 4, Budapest H-1111, HungaryDepartment of Materials Science and Nanotechnology Engineering, KTO Karatay University, Konya 42020, TurkeyMTA-BME “Lendület” Chemical Nanosensors Research Group, Department of Inorganic and Analytical Chemistry, Budapest University of Technology and Economics, Szent Gellért tér 4, Budapest H-1111, HungaryFraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalytics and Bioprocesses (IZI-BB), Am Mühlenberg 13, Potsdam D-14476, GermanyBiomimetic binders and catalysts have been generated in order to substitute the biological pendants in separation techniques and bioanalysis. The two major approaches use either “evolution in the test tube” of nucleotides for the preparation of aptamers or total chemical synthesis for molecularly imprinted polymers (MIPs). The reproducible production of aptamers is a clear advantage, whilst the preparation of MIPs typically leads to a population of polymers with different binding sites. The realization of binding sites in the total bulk of the MIPs results in a higher binding capacity, however, on the expense of the accessibility and exchange rate. Furthermore, the readout of the bound analyte is easier for aptamers since the integration of signal generating labels is well established. On the other hand, the overall negative charge of the nucleotides makes aptamers prone to non-specific adsorption of positively charged constituents of the sample and the “biological” degradation of non-modified aptamers and ionic strength-dependent changes of conformation may be challenging in some application.http://www.mdpi.com/2079-6374/6/3/35biomimetic recognition elementsaptamersmolecularly imprinted polymerschemical sensorsaptasensorsin vitro selectionSELEX |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Marcus Menger Aysu Yarman Júlia Erdőssy Huseyin Bekir Yildiz Róbert E. Gyurcsányi Frieder W. Scheller |
spellingShingle |
Marcus Menger Aysu Yarman Júlia Erdőssy Huseyin Bekir Yildiz Róbert E. Gyurcsányi Frieder W. Scheller MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing Biosensors biomimetic recognition elements aptamers molecularly imprinted polymers chemical sensors aptasensors in vitro selection SELEX |
author_facet |
Marcus Menger Aysu Yarman Júlia Erdőssy Huseyin Bekir Yildiz Róbert E. Gyurcsányi Frieder W. Scheller |
author_sort |
Marcus Menger |
title |
MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing |
title_short |
MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing |
title_full |
MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing |
title_fullStr |
MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing |
title_full_unstemmed |
MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing |
title_sort |
mips and aptamers for recognition of proteins in biomimetic sensing |
publisher |
MDPI AG |
series |
Biosensors |
issn |
2079-6374 |
publishDate |
2016-07-01 |
description |
Biomimetic binders and catalysts have been generated in order to substitute the biological pendants in separation techniques and bioanalysis. The two major approaches use either “evolution in the test tube” of nucleotides for the preparation of aptamers or total chemical synthesis for molecularly imprinted polymers (MIPs). The reproducible production of aptamers is a clear advantage, whilst the preparation of MIPs typically leads to a population of polymers with different binding sites. The realization of binding sites in the total bulk of the MIPs results in a higher binding capacity, however, on the expense of the accessibility and exchange rate. Furthermore, the readout of the bound analyte is easier for aptamers since the integration of signal generating labels is well established. On the other hand, the overall negative charge of the nucleotides makes aptamers prone to non-specific adsorption of positively charged constituents of the sample and the “biological” degradation of non-modified aptamers and ionic strength-dependent changes of conformation may be challenging in some application. |
topic |
biomimetic recognition elements aptamers molecularly imprinted polymers chemical sensors aptasensors in vitro selection SELEX |
url |
http://www.mdpi.com/2079-6374/6/3/35 |
work_keys_str_mv |
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