Network-Based Association Study of Obesity and Type 2 Diabetes with Gene Expression Profiles

The increased prevalence of obesity and type 2 diabetes (T2D) has become an important factor affecting the health of the human. Obesity is commonly considered as a major risk factor for the development of T2D. However, the molecular mechanisms of the disease relations are not well discovered yet. In...

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Main Authors: Siyi Zhang, Bo Wang, Jingsong Shi, Jing Li
Format: Article
Language:English
Published: Hindawi Limited 2015-01-01
Series:BioMed Research International
Online Access:http://dx.doi.org/10.1155/2015/619730
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spelling doaj-820ad01086464038bcf826fe0e63373c2020-11-24T23:04:52ZengHindawi LimitedBioMed Research International2314-61332314-61412015-01-01201510.1155/2015/619730619730Network-Based Association Study of Obesity and Type 2 Diabetes with Gene Expression ProfilesSiyi Zhang0Bo Wang1Jingsong Shi2Jing Li3Department of Bioinformatics & Biostatistics, School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, ChinaDepartment of Bioinformatics & Biostatistics, School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, ChinaNational Clinical Research Center of Kidney Disease, Jinling Hospital, Nanjing University School of Medicine, Nanjing 210016, ChinaDepartment of Bioinformatics & Biostatistics, School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, ChinaThe increased prevalence of obesity and type 2 diabetes (T2D) has become an important factor affecting the health of the human. Obesity is commonly considered as a major risk factor for the development of T2D. However, the molecular mechanisms of the disease relations are not well discovered yet. In this study, the combination of multiple differential expression profiles and a comprehensive biological network of obesity and T2D allowed us to identify and compare the disease-responsive active modules and subclusters. The results demonstrated that the connection between obesity and T2D mainly relied on several pathways involved in the digestive metabolism, immunization, and signal transduction, such as adipocytokine, chemokine signaling pathway, T cell receptor signaling pathway, and MAPK signaling pathways. The relationships of almost all of these pathways with obesity and T2D have been verified by the previous reports individually. We also found that the different parts in the same pathway are activated in obesity and T2D. The association of cancer, obesity, and T2D was identified too here. As a conclusion, our network-based method not only gives better support for the close connection between obesity and T2D, but also provides a systemic view in understanding the molecular functions underneath the links. It should be helpful in the development of new therapies for obesity, T2D, and the associated diseases.http://dx.doi.org/10.1155/2015/619730
collection DOAJ
language English
format Article
sources DOAJ
author Siyi Zhang
Bo Wang
Jingsong Shi
Jing Li
spellingShingle Siyi Zhang
Bo Wang
Jingsong Shi
Jing Li
Network-Based Association Study of Obesity and Type 2 Diabetes with Gene Expression Profiles
BioMed Research International
author_facet Siyi Zhang
Bo Wang
Jingsong Shi
Jing Li
author_sort Siyi Zhang
title Network-Based Association Study of Obesity and Type 2 Diabetes with Gene Expression Profiles
title_short Network-Based Association Study of Obesity and Type 2 Diabetes with Gene Expression Profiles
title_full Network-Based Association Study of Obesity and Type 2 Diabetes with Gene Expression Profiles
title_fullStr Network-Based Association Study of Obesity and Type 2 Diabetes with Gene Expression Profiles
title_full_unstemmed Network-Based Association Study of Obesity and Type 2 Diabetes with Gene Expression Profiles
title_sort network-based association study of obesity and type 2 diabetes with gene expression profiles
publisher Hindawi Limited
series BioMed Research International
issn 2314-6133
2314-6141
publishDate 2015-01-01
description The increased prevalence of obesity and type 2 diabetes (T2D) has become an important factor affecting the health of the human. Obesity is commonly considered as a major risk factor for the development of T2D. However, the molecular mechanisms of the disease relations are not well discovered yet. In this study, the combination of multiple differential expression profiles and a comprehensive biological network of obesity and T2D allowed us to identify and compare the disease-responsive active modules and subclusters. The results demonstrated that the connection between obesity and T2D mainly relied on several pathways involved in the digestive metabolism, immunization, and signal transduction, such as adipocytokine, chemokine signaling pathway, T cell receptor signaling pathway, and MAPK signaling pathways. The relationships of almost all of these pathways with obesity and T2D have been verified by the previous reports individually. We also found that the different parts in the same pathway are activated in obesity and T2D. The association of cancer, obesity, and T2D was identified too here. As a conclusion, our network-based method not only gives better support for the close connection between obesity and T2D, but also provides a systemic view in understanding the molecular functions underneath the links. It should be helpful in the development of new therapies for obesity, T2D, and the associated diseases.
url http://dx.doi.org/10.1155/2015/619730
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