Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)
Premise of the study: Microsatellite markers were developed for the coastal shrub species <i>Scaevola taccada</i> to estimate the population genetic structure, which may reflect different seed dispersal patterns. Methods and Results: Thirteen microsatellite primer sets were developed fo...
Main Authors: | , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Wiley
2014-04-01
|
Series: | Applications in Plant Sciences |
Subjects: | |
Online Access: | http://www.bioone.org/doi/full/10.3732/apps.1300094 |
id |
doaj-81261c3c29964f8f978d1cb66efedc1c |
---|---|
record_format |
Article |
spelling |
doaj-81261c3c29964f8f978d1cb66efedc1c2020-11-25T01:01:43ZengWileyApplications in Plant Sciences2168-04502014-04-0125130009410.3732/apps.1300094Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)Haruko Ando0Naoko Emura1Tetsuro Denda2Naoyuki Nakahama3Miho Inoue-Murayama4Yuji Isagi5Laboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, JapanDepartment of Life Science, Rikkyo University, Tokyo 171-8501, JapanFaculty of Science, University of the Ryukyus, Okinawa 903-0213, JapanLaboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, JapanWildlife Research Center, Kyoto University, Kyoto 606-8203, JapanLaboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, JapanPremise of the study: Microsatellite markers were developed for the coastal shrub species <i>Scaevola taccada</i> to estimate the population genetic structure, which may reflect different seed dispersal patterns. Methods and Results: Thirteen microsatellite primer sets were developed for <i>S. taccada</i> using 454 pyrosequencing. The primer sets were tested on 64 individuals sampled from two populations in Japan. Fragments were amplified using the primers, with one to 10 alleles per locus, and the expected heterozygosity ranged from 0.00 to 0.85. Conclusions: These results indicate the utility of markers in <i>S. taccada</i> for broad estimations of the population genetic structure of this species.http://www.bioone.org/doi/full/10.3732/apps.1300094454 sequencinggenetic structureGoodeniaceaeScaevola taccadaseed dispersal |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Haruko Ando Naoko Emura Tetsuro Denda Naoyuki Nakahama Miho Inoue-Murayama Yuji Isagi |
spellingShingle |
Haruko Ando Naoko Emura Tetsuro Denda Naoyuki Nakahama Miho Inoue-Murayama Yuji Isagi Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae) Applications in Plant Sciences 454 sequencing genetic structure Goodeniaceae Scaevola taccada seed dispersal |
author_facet |
Haruko Ando Naoko Emura Tetsuro Denda Naoyuki Nakahama Miho Inoue-Murayama Yuji Isagi |
author_sort |
Haruko Ando |
title |
Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae) |
title_short |
Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae) |
title_full |
Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae) |
title_fullStr |
Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae) |
title_full_unstemmed |
Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae) |
title_sort |
development of microsatellite markers for the coastal shrub <i>scaevola taccada</i> (goodeniaceae) |
publisher |
Wiley |
series |
Applications in Plant Sciences |
issn |
2168-0450 |
publishDate |
2014-04-01 |
description |
Premise of the study: Microsatellite markers were developed for the coastal shrub species <i>Scaevola taccada</i> to estimate the population genetic structure, which may reflect different seed dispersal patterns.
Methods and Results: Thirteen microsatellite primer sets were developed for <i>S. taccada</i> using 454 pyrosequencing. The primer sets were tested on 64 individuals sampled from two populations in Japan. Fragments were amplified using the primers, with one to 10 alleles per locus, and the expected heterozygosity ranged from 0.00 to 0.85.
Conclusions: These results indicate the utility of markers in <i>S. taccada</i> for broad estimations of the population genetic structure of this species. |
topic |
454 sequencing genetic structure Goodeniaceae Scaevola taccada seed dispersal |
url |
http://www.bioone.org/doi/full/10.3732/apps.1300094 |
work_keys_str_mv |
AT harukoando developmentofmicrosatellitemarkersforthecoastalshrubiscaevolataccadaigoodeniaceae AT naokoemura developmentofmicrosatellitemarkersforthecoastalshrubiscaevolataccadaigoodeniaceae AT tetsurodenda developmentofmicrosatellitemarkersforthecoastalshrubiscaevolataccadaigoodeniaceae AT naoyukinakahama developmentofmicrosatellitemarkersforthecoastalshrubiscaevolataccadaigoodeniaceae AT mihoinouemurayama developmentofmicrosatellitemarkersforthecoastalshrubiscaevolataccadaigoodeniaceae AT yujiisagi developmentofmicrosatellitemarkersforthecoastalshrubiscaevolataccadaigoodeniaceae |
_version_ |
1725207730133663744 |