Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)

Premise of the study: Microsatellite markers were developed for the coastal shrub species <i>Scaevola taccada</i> to estimate the population genetic structure, which may reflect different seed dispersal patterns. Methods and Results: Thirteen microsatellite primer sets were developed fo...

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Main Authors: Haruko Ando, Naoko Emura, Tetsuro Denda, Naoyuki Nakahama, Miho Inoue-Murayama, Yuji Isagi
Format: Article
Language:English
Published: Wiley 2014-04-01
Series:Applications in Plant Sciences
Subjects:
Online Access:http://www.bioone.org/doi/full/10.3732/apps.1300094
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spelling doaj-81261c3c29964f8f978d1cb66efedc1c2020-11-25T01:01:43ZengWileyApplications in Plant Sciences2168-04502014-04-0125130009410.3732/apps.1300094Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)Haruko Ando0Naoko Emura1Tetsuro Denda2Naoyuki Nakahama3Miho Inoue-Murayama4Yuji Isagi5Laboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, JapanDepartment of Life Science, Rikkyo University, Tokyo 171-8501, JapanFaculty of Science, University of the Ryukyus, Okinawa 903-0213, JapanLaboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, JapanWildlife Research Center, Kyoto University, Kyoto 606-8203, JapanLaboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, JapanPremise of the study: Microsatellite markers were developed for the coastal shrub species <i>Scaevola taccada</i> to estimate the population genetic structure, which may reflect different seed dispersal patterns. Methods and Results: Thirteen microsatellite primer sets were developed for <i>S. taccada</i> using 454 pyrosequencing. The primer sets were tested on 64 individuals sampled from two populations in Japan. Fragments were amplified using the primers, with one to 10 alleles per locus, and the expected heterozygosity ranged from 0.00 to 0.85. Conclusions: These results indicate the utility of markers in <i>S. taccada</i> for broad estimations of the population genetic structure of this species.http://www.bioone.org/doi/full/10.3732/apps.1300094454 sequencinggenetic structureGoodeniaceaeScaevola taccadaseed dispersal
collection DOAJ
language English
format Article
sources DOAJ
author Haruko Ando
Naoko Emura
Tetsuro Denda
Naoyuki Nakahama
Miho Inoue-Murayama
Yuji Isagi
spellingShingle Haruko Ando
Naoko Emura
Tetsuro Denda
Naoyuki Nakahama
Miho Inoue-Murayama
Yuji Isagi
Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)
Applications in Plant Sciences
454 sequencing
genetic structure
Goodeniaceae
Scaevola taccada
seed dispersal
author_facet Haruko Ando
Naoko Emura
Tetsuro Denda
Naoyuki Nakahama
Miho Inoue-Murayama
Yuji Isagi
author_sort Haruko Ando
title Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)
title_short Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)
title_full Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)
title_fullStr Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)
title_full_unstemmed Development of Microsatellite Markers for the Coastal Shrub <i>Scaevola taccada</i> (Goodeniaceae)
title_sort development of microsatellite markers for the coastal shrub <i>scaevola taccada</i> (goodeniaceae)
publisher Wiley
series Applications in Plant Sciences
issn 2168-0450
publishDate 2014-04-01
description Premise of the study: Microsatellite markers were developed for the coastal shrub species <i>Scaevola taccada</i> to estimate the population genetic structure, which may reflect different seed dispersal patterns. Methods and Results: Thirteen microsatellite primer sets were developed for <i>S. taccada</i> using 454 pyrosequencing. The primer sets were tested on 64 individuals sampled from two populations in Japan. Fragments were amplified using the primers, with one to 10 alleles per locus, and the expected heterozygosity ranged from 0.00 to 0.85. Conclusions: These results indicate the utility of markers in <i>S. taccada</i> for broad estimations of the population genetic structure of this species.
topic 454 sequencing
genetic structure
Goodeniaceae
Scaevola taccada
seed dispersal
url http://www.bioone.org/doi/full/10.3732/apps.1300094
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