On the persistence of supplementary resources in biomedical publications

<p>Abstract</p> <p>Background</p> <p>Providing for long-term and consistent public access to scientific data is a growing concern in biomedical research. One aspect of this problem can be demonstrated by evaluating the persistence of supplementary data associated with p...

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Main Authors: Tarczy-Hornoch Peter, Anderson Nicholas R, Bumgarner Roger E
Format: Article
Language:English
Published: BMC 2006-05-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/7/260
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spelling doaj-810581af03114820964046577092b3a52020-11-25T02:42:45ZengBMCBMC Bioinformatics1471-21052006-05-017126010.1186/1471-2105-7-260On the persistence of supplementary resources in biomedical publicationsTarczy-Hornoch PeterAnderson Nicholas RBumgarner Roger E<p>Abstract</p> <p>Background</p> <p>Providing for long-term and consistent public access to scientific data is a growing concern in biomedical research. One aspect of this problem can be demonstrated by evaluating the persistence of supplementary data associated with published biomedical papers.</p> <p>Methods</p> <p>We manually evaluated 655 supplementary data links extracted from PubMed abstracts published 1998–2005 (Method 1) as well as a further focused subset of 162 full-text manuscripts published within three representative high-impact biomedical journals between September and December 2004 (Method 2).</p> <p>Results</p> <p>For Method 1 we found that since 2001, only 71 – 92% of supplementary data were still accessible via the links provided, with 93% of these inaccessible links occurring where supplementary data was not stored with the publishing journal. Of the manuscripts evaluated in Method 2, we found that only 83% of these links were available approximately a year after publication, with 55% of these inaccessible links were at locations outside the journal of publication.</p> <p>Conclusion</p> <p>We conclude that if supplemental data is required to support the publication, journals policies must take-on the responsibility to accept and store such data or require that it be maintained with a credible independent institution or under the terms of a strategic data storage plan specified by the authors. We further recommend that publishers provide automated systems to ensure that supplementary links remain persistent, and that granting bodies such as the NIH develop policies and funding mechanisms to maintain long-term persistent access to these data.</p> http://www.biomedcentral.com/1471-2105/7/260
collection DOAJ
language English
format Article
sources DOAJ
author Tarczy-Hornoch Peter
Anderson Nicholas R
Bumgarner Roger E
spellingShingle Tarczy-Hornoch Peter
Anderson Nicholas R
Bumgarner Roger E
On the persistence of supplementary resources in biomedical publications
BMC Bioinformatics
author_facet Tarczy-Hornoch Peter
Anderson Nicholas R
Bumgarner Roger E
author_sort Tarczy-Hornoch Peter
title On the persistence of supplementary resources in biomedical publications
title_short On the persistence of supplementary resources in biomedical publications
title_full On the persistence of supplementary resources in biomedical publications
title_fullStr On the persistence of supplementary resources in biomedical publications
title_full_unstemmed On the persistence of supplementary resources in biomedical publications
title_sort on the persistence of supplementary resources in biomedical publications
publisher BMC
series BMC Bioinformatics
issn 1471-2105
publishDate 2006-05-01
description <p>Abstract</p> <p>Background</p> <p>Providing for long-term and consistent public access to scientific data is a growing concern in biomedical research. One aspect of this problem can be demonstrated by evaluating the persistence of supplementary data associated with published biomedical papers.</p> <p>Methods</p> <p>We manually evaluated 655 supplementary data links extracted from PubMed abstracts published 1998–2005 (Method 1) as well as a further focused subset of 162 full-text manuscripts published within three representative high-impact biomedical journals between September and December 2004 (Method 2).</p> <p>Results</p> <p>For Method 1 we found that since 2001, only 71 – 92% of supplementary data were still accessible via the links provided, with 93% of these inaccessible links occurring where supplementary data was not stored with the publishing journal. Of the manuscripts evaluated in Method 2, we found that only 83% of these links were available approximately a year after publication, with 55% of these inaccessible links were at locations outside the journal of publication.</p> <p>Conclusion</p> <p>We conclude that if supplemental data is required to support the publication, journals policies must take-on the responsibility to accept and store such data or require that it be maintained with a credible independent institution or under the terms of a strategic data storage plan specified by the authors. We further recommend that publishers provide automated systems to ensure that supplementary links remain persistent, and that granting bodies such as the NIH develop policies and funding mechanisms to maintain long-term persistent access to these data.</p>
url http://www.biomedcentral.com/1471-2105/7/260
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