Automated craniofacial landmarks detection on 3D image using geometry characteristics information

Abstract Background Indirect anthropometry (IA) is one of the craniofacial anthropometry methods to perform the measurements on the digital facial images. In order to get the linear measurements, a few definable points on the structures of individual facial images have to be plotted as landmark poin...

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Main Authors: Arpah Abu, Chee Guan Ngo, Nur Idayu Adira Abu-Hassan, Siti Adibah Othman
Format: Article
Language:English
Published: BMC 2019-02-01
Series:BMC Bioinformatics
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12859-018-2548-9
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spelling doaj-80bfec0c30da46e3ab13b489cc85b4092020-11-25T01:41:10ZengBMCBMC Bioinformatics1471-21052019-02-0119S13658010.1186/s12859-018-2548-9Automated craniofacial landmarks detection on 3D image using geometry characteristics informationArpah Abu0Chee Guan Ngo1Nur Idayu Adira Abu-Hassan2Siti Adibah Othman3Institute of Biological Sciences, Faculty of Science, University of MalayaInstitute of Biological Sciences, Faculty of Science, University of MalayaDepartment of Diagnostic & Allied Health Science, Faculty of Health & Life Sciences, Management & Science UniversityDepartment of Paediatric Dentistry and Orthodontics / Clinical Craniofacial Dentistry Research Group, Faculty of Dentistry, University of MalayaAbstract Background Indirect anthropometry (IA) is one of the craniofacial anthropometry methods to perform the measurements on the digital facial images. In order to get the linear measurements, a few definable points on the structures of individual facial images have to be plotted as landmark points. Currently, most anthropometric studies use landmark points that are manually plotted on a 3D facial image by the examiner. This method is time-consuming and leads to human biases, which will vary from intra-examiners to inter-examiners when involving large data sets. Biased judgment also leads to a wider gap in measurement error. Thus, this work aims to automate the process of landmarks detection to help in enhancing the accuracy of measurement. In this work, automated craniofacial landmarks (ACL) on a 3D facial image system was developed using geometry characteristics information to identify the nasion (n), pronasale (prn), subnasale (sn), alare (al), labiale superius (ls), stomion (sto), labiale inferius (li), and chelion (ch). These landmarks were detected on the 3D facial image in .obj file format. The IA was also performed by manually plotting the craniofacial landmarks using Mirror software. In both methods, once all landmarks were detected, the eight linear measurements were then extracted. Paired t-test was performed to check the validity of ACL (i) between the subjects and (ii) between the two methods, by comparing the linear measurements extracted from both ACL and AI. The tests were performed on 60 subjects (30 males and 30 females). Results The results on the validity of the ACL against IA between the subjects show accurate detection of n, sn, prn, sto, ls and li landmarks. The paired t-test showed that the seven linear measurements were statistically significant when p < 0.05. As for the results on the validity of the ACL against IA between the methods, ACL is more accurate when p ≈ 0.03. Conclusions In conclusion, ACL has been validated with the eight landmarks and is suitable for automated facial recognition. ACL has proved its validity and demonstrated the practicability to be used as an alternative for IA, as it is time-saving and free from human biases.http://link.springer.com/article/10.1186/s12859-018-2548-9Indirect anthropometryAutomated craniofacial landmarks3D facial imageGeometry characteristics information
collection DOAJ
language English
format Article
sources DOAJ
author Arpah Abu
Chee Guan Ngo
Nur Idayu Adira Abu-Hassan
Siti Adibah Othman
spellingShingle Arpah Abu
Chee Guan Ngo
Nur Idayu Adira Abu-Hassan
Siti Adibah Othman
Automated craniofacial landmarks detection on 3D image using geometry characteristics information
BMC Bioinformatics
Indirect anthropometry
Automated craniofacial landmarks
3D facial image
Geometry characteristics information
author_facet Arpah Abu
Chee Guan Ngo
Nur Idayu Adira Abu-Hassan
Siti Adibah Othman
author_sort Arpah Abu
title Automated craniofacial landmarks detection on 3D image using geometry characteristics information
title_short Automated craniofacial landmarks detection on 3D image using geometry characteristics information
title_full Automated craniofacial landmarks detection on 3D image using geometry characteristics information
title_fullStr Automated craniofacial landmarks detection on 3D image using geometry characteristics information
title_full_unstemmed Automated craniofacial landmarks detection on 3D image using geometry characteristics information
title_sort automated craniofacial landmarks detection on 3d image using geometry characteristics information
publisher BMC
series BMC Bioinformatics
issn 1471-2105
publishDate 2019-02-01
description Abstract Background Indirect anthropometry (IA) is one of the craniofacial anthropometry methods to perform the measurements on the digital facial images. In order to get the linear measurements, a few definable points on the structures of individual facial images have to be plotted as landmark points. Currently, most anthropometric studies use landmark points that are manually plotted on a 3D facial image by the examiner. This method is time-consuming and leads to human biases, which will vary from intra-examiners to inter-examiners when involving large data sets. Biased judgment also leads to a wider gap in measurement error. Thus, this work aims to automate the process of landmarks detection to help in enhancing the accuracy of measurement. In this work, automated craniofacial landmarks (ACL) on a 3D facial image system was developed using geometry characteristics information to identify the nasion (n), pronasale (prn), subnasale (sn), alare (al), labiale superius (ls), stomion (sto), labiale inferius (li), and chelion (ch). These landmarks were detected on the 3D facial image in .obj file format. The IA was also performed by manually plotting the craniofacial landmarks using Mirror software. In both methods, once all landmarks were detected, the eight linear measurements were then extracted. Paired t-test was performed to check the validity of ACL (i) between the subjects and (ii) between the two methods, by comparing the linear measurements extracted from both ACL and AI. The tests were performed on 60 subjects (30 males and 30 females). Results The results on the validity of the ACL against IA between the subjects show accurate detection of n, sn, prn, sto, ls and li landmarks. The paired t-test showed that the seven linear measurements were statistically significant when p < 0.05. As for the results on the validity of the ACL against IA between the methods, ACL is more accurate when p ≈ 0.03. Conclusions In conclusion, ACL has been validated with the eight landmarks and is suitable for automated facial recognition. ACL has proved its validity and demonstrated the practicability to be used as an alternative for IA, as it is time-saving and free from human biases.
topic Indirect anthropometry
Automated craniofacial landmarks
3D facial image
Geometry characteristics information
url http://link.springer.com/article/10.1186/s12859-018-2548-9
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