A quantitative SVM approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomas
Abstrct: Objectives: To investigate the association between proton magnetic resonance spectroscopy (1H-MRS) metabolic features and the grade of gliomas, and to establish a machine-learning model to predict the glioma grade. Methods: This study included 112 glioma patients who were divided into the...
Main Authors: | , , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Elsevier
2019-01-01
|
Series: | NeuroImage: Clinical |
Online Access: | http://www.sciencedirect.com/science/article/pii/S2213158219301858 |
id |
doaj-80431b7a63344921b876aa5543e28446 |
---|---|
record_format |
Article |
spelling |
doaj-80431b7a63344921b876aa5543e284462020-11-25T00:03:58ZengElsevierNeuroImage: Clinical2213-15822019-01-0123A quantitative SVM approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomasChong Qi0Yiming Li1Xing Fan2Yin Jiang3Rui Wang4Song Yang5Lanxi Meng6Tao Jiang7Shaowu Li8Beijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, ChinaBeijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China; Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, ChinaBeijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, ChinaBeijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, ChinaBeijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, ChinaBeijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, ChinaBeijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, ChinaBeijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China; Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China; National Clinical Research Center for Neurological Diseases, Beijing, China; Center of Brain Tumor, Beijing Institute for Brain Disorders, China; Chinese Glioma Genome Atlas Network (CGGA) and Asian Glioma Genome Atlas Network (AGGA), China; Corresponding authors at: Beijing Neurosurgical Institute, Capital Medical University, 6 Tiantanxili, Beijing 100050, China.Beijing Neurosurgical Institute, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China; National Clinical Research Center for Neurological Diseases, Beijing, China; Corresponding authors at: Beijing Neurosurgical Institute, Capital Medical University, 6 Tiantanxili, Beijing 100050, China.Abstrct: Objectives: To investigate the association between proton magnetic resonance spectroscopy (1H-MRS) metabolic features and the grade of gliomas, and to establish a machine-learning model to predict the glioma grade. Methods: This study included 112 glioma patients who were divided into the training (n = 74) and validation (n = 38) sets based on the time of hospitalization. Twenty-six metabolic features were extracted from the preoperative 1H-MRS image. The Student's t-test was conducted to screen for differentially expressed features between low- and high-grade gliomas (WHO grades II and III/IV, respectively). Next, the minimum Redundancy Maximum Relevance (mRMR) algorithm was performed to further select features for a support vector machine (SVM) classifier building. Performance of the predictive model was evaluated both in the training and validation sets using ROC curve analysis. Results: Among the extracted 1H-MRS metabolic features, thirteen features were differentially expressed. Four features were further selected as grade-predictive imaging signatures using the mRMR algorithm. The predictive performance of the machine-learning model measured by the AUC was 0.825 and 0.820 in the training and validation sets, respectively. This was better than the predictive performances of individual metabolic features, the best of which was 0.812. Conclusions: 1H-MRS metabolic features could help in predicting the grade of gliomas. The machine-learning model achieved a better prediction performance in grading gliomas than individual features, indicating that it could complement the traditionally used metabolic features. Keywords: Proton magnetic resonance spectroscopy, Machine learning, Glioma grading, Support vector machinehttp://www.sciencedirect.com/science/article/pii/S2213158219301858 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Chong Qi Yiming Li Xing Fan Yin Jiang Rui Wang Song Yang Lanxi Meng Tao Jiang Shaowu Li |
spellingShingle |
Chong Qi Yiming Li Xing Fan Yin Jiang Rui Wang Song Yang Lanxi Meng Tao Jiang Shaowu Li A quantitative SVM approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomas NeuroImage: Clinical |
author_facet |
Chong Qi Yiming Li Xing Fan Yin Jiang Rui Wang Song Yang Lanxi Meng Tao Jiang Shaowu Li |
author_sort |
Chong Qi |
title |
A quantitative SVM approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomas |
title_short |
A quantitative SVM approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomas |
title_full |
A quantitative SVM approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomas |
title_fullStr |
A quantitative SVM approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomas |
title_full_unstemmed |
A quantitative SVM approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomas |
title_sort |
quantitative svm approach potentially improves the accuracy of magnetic resonance spectroscopy in the preoperative evaluation of the grades of diffuse gliomas |
publisher |
Elsevier |
series |
NeuroImage: Clinical |
issn |
2213-1582 |
publishDate |
2019-01-01 |
description |
Abstrct: Objectives: To investigate the association between proton magnetic resonance spectroscopy (1H-MRS) metabolic features and the grade of gliomas, and to establish a machine-learning model to predict the glioma grade. Methods: This study included 112 glioma patients who were divided into the training (n = 74) and validation (n = 38) sets based on the time of hospitalization. Twenty-six metabolic features were extracted from the preoperative 1H-MRS image. The Student's t-test was conducted to screen for differentially expressed features between low- and high-grade gliomas (WHO grades II and III/IV, respectively). Next, the minimum Redundancy Maximum Relevance (mRMR) algorithm was performed to further select features for a support vector machine (SVM) classifier building. Performance of the predictive model was evaluated both in the training and validation sets using ROC curve analysis. Results: Among the extracted 1H-MRS metabolic features, thirteen features were differentially expressed. Four features were further selected as grade-predictive imaging signatures using the mRMR algorithm. The predictive performance of the machine-learning model measured by the AUC was 0.825 and 0.820 in the training and validation sets, respectively. This was better than the predictive performances of individual metabolic features, the best of which was 0.812. Conclusions: 1H-MRS metabolic features could help in predicting the grade of gliomas. The machine-learning model achieved a better prediction performance in grading gliomas than individual features, indicating that it could complement the traditionally used metabolic features. Keywords: Proton magnetic resonance spectroscopy, Machine learning, Glioma grading, Support vector machine |
url |
http://www.sciencedirect.com/science/article/pii/S2213158219301858 |
work_keys_str_mv |
AT chongqi aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT yimingli aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT xingfan aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT yinjiang aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT ruiwang aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT songyang aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT lanximeng aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT taojiang aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT shaowuli aquantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT chongqi quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT yimingli quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT xingfan quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT yinjiang quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT ruiwang quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT songyang quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT lanximeng quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT taojiang quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas AT shaowuli quantitativesvmapproachpotentiallyimprovestheaccuracyofmagneticresonancespectroscopyinthepreoperativeevaluationofthegradesofdiffusegliomas |
_version_ |
1725431714523643904 |