Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host Disease

Cutaneous erythema is used in diagnosis and response assessment of cutaneous chronic graft-versus-host disease (cGVHD). The development of objective erythema evaluation methods remains a challenge. We used a pre-trained neural network to segment cGVHD erythema by detecting changes relative to a pati...

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Main Authors: Xiaoqi Liu, Kelsey Parks, Inga Saknite, Tahsin Reasat, Austin D. Cronin, Lee E. Wheless, Benoit M. Dawant, Eric R. Tkaczyk
Format: Article
Language:English
Published: Atlantis Press 2021-07-01
Series:Clinical Hematology International
Subjects:
Online Access:https://www.atlantis-press.com/article/125958581/view
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spelling doaj-7fef6828160d4c5b80da2ff5c6f95cb92021-09-12T08:19:40ZengAtlantis PressClinical Hematology International2590-00482021-07-013310.2991/chi.k.210704.001Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host DiseaseXiaoqi LiuKelsey ParksInga SakniteTahsin ReasatAustin D. CroninLee E. WhelessBenoit M. DawantEric R. TkaczykCutaneous erythema is used in diagnosis and response assessment of cutaneous chronic graft-versus-host disease (cGVHD). The development of objective erythema evaluation methods remains a challenge. We used a pre-trained neural network to segment cGVHD erythema by detecting changes relative to a patient’s registered baseline photo. We fixed this change detection algorithm on human annotations from a single photo pair, by using either a traditional approach or by marking definitely affected (“Do Not Miss”, DNM) and definitely unaffected skin (“Do Not Include”, DNI). The fixed algorithm was applied to each of the remaining 47 test photo pairs from six follow-up sessions of one patient. We used both the Dice index and the opinion of two board-certified dermatologists to evaluate the algorithm performance. The change detection algorithm correctly assigned 80% of the pixels, regardless of whether it was fixed on traditional (median accuracy: 0.77, interquartile range 0.62–0.87) or DNM/DNI segmentations (0.81, 0.65–0.89). When the algorithm was fixed on markings by different annotators, the DNM/DNI achieved more consistent outputs (median Dice indices: 0.94–0.96) than the traditional method (0.73–0.81). Compared to viewing only rash photos, the addition of baseline photos improved the reliability of dermatologists’ scoring. The inter-rater intraclass correlation coefficient increased from 0.19 (95% confidence interval lower bound: 0.06) to 0.51 (lower bound: 0.35). In conclusion, a change detection algorithm accurately assigned erythema in longitudinal photos of cGVHD. The reliability was significantly improved by exclusively using confident human segmentations to fix the algorithm. Baseline photos improved the agreement among two dermatologists in assessing algorithm performance.https://www.atlantis-press.com/article/125958581/viewCutaneous erythemachronic graft-versus-host diseasechange detectionlongitudinal photosbaseline photoscomputer vision
collection DOAJ
language English
format Article
sources DOAJ
author Xiaoqi Liu
Kelsey Parks
Inga Saknite
Tahsin Reasat
Austin D. Cronin
Lee E. Wheless
Benoit M. Dawant
Eric R. Tkaczyk
spellingShingle Xiaoqi Liu
Kelsey Parks
Inga Saknite
Tahsin Reasat
Austin D. Cronin
Lee E. Wheless
Benoit M. Dawant
Eric R. Tkaczyk
Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host Disease
Clinical Hematology International
Cutaneous erythema
chronic graft-versus-host disease
change detection
longitudinal photos
baseline photos
computer vision
author_facet Xiaoqi Liu
Kelsey Parks
Inga Saknite
Tahsin Reasat
Austin D. Cronin
Lee E. Wheless
Benoit M. Dawant
Eric R. Tkaczyk
author_sort Xiaoqi Liu
title Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host Disease
title_short Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host Disease
title_full Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host Disease
title_fullStr Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host Disease
title_full_unstemmed Baseline Photos and Confident Annotation Improve Automated Detection of Cutaneous Graft-Versus-Host Disease
title_sort baseline photos and confident annotation improve automated detection of cutaneous graft-versus-host disease
publisher Atlantis Press
series Clinical Hematology International
issn 2590-0048
publishDate 2021-07-01
description Cutaneous erythema is used in diagnosis and response assessment of cutaneous chronic graft-versus-host disease (cGVHD). The development of objective erythema evaluation methods remains a challenge. We used a pre-trained neural network to segment cGVHD erythema by detecting changes relative to a patient’s registered baseline photo. We fixed this change detection algorithm on human annotations from a single photo pair, by using either a traditional approach or by marking definitely affected (“Do Not Miss”, DNM) and definitely unaffected skin (“Do Not Include”, DNI). The fixed algorithm was applied to each of the remaining 47 test photo pairs from six follow-up sessions of one patient. We used both the Dice index and the opinion of two board-certified dermatologists to evaluate the algorithm performance. The change detection algorithm correctly assigned 80% of the pixels, regardless of whether it was fixed on traditional (median accuracy: 0.77, interquartile range 0.62–0.87) or DNM/DNI segmentations (0.81, 0.65–0.89). When the algorithm was fixed on markings by different annotators, the DNM/DNI achieved more consistent outputs (median Dice indices: 0.94–0.96) than the traditional method (0.73–0.81). Compared to viewing only rash photos, the addition of baseline photos improved the reliability of dermatologists’ scoring. The inter-rater intraclass correlation coefficient increased from 0.19 (95% confidence interval lower bound: 0.06) to 0.51 (lower bound: 0.35). In conclusion, a change detection algorithm accurately assigned erythema in longitudinal photos of cGVHD. The reliability was significantly improved by exclusively using confident human segmentations to fix the algorithm. Baseline photos improved the agreement among two dermatologists in assessing algorithm performance.
topic Cutaneous erythema
chronic graft-versus-host disease
change detection
longitudinal photos
baseline photos
computer vision
url https://www.atlantis-press.com/article/125958581/view
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