Study of genetic diversity of some genotypes of iranian wild mint (Mentha longifolia L.) using ISSR marker and its correlation with dry yield and essential oil content

Objective This study aimed to investigate the genetic diversity of different genotypes of this valuable medicinal plant under the same culture condition which can be used as an introduction to domestication, germplasm conservation, and possible cross in the future.   Materials and Methods In this st...

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Main Authors: Alireza Moshrefi-Araghi, Hossein Nemati, Majid Azizi, nasrin Meshkani, Mahmood Shoor
Format: Article
Language:fas
Published: Shahid Bahonar University of Kerman 2020-10-01
Series:مجله بیوتکنولوژی کشاورزی
Subjects:
Online Access:https://jab.uk.ac.ir/article_2736_8f4aa73d74514055d002677523a6a2a1.pdf
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spelling doaj-7ef92d363d6e453e9e966586f5479b0b2021-02-15T19:53:52ZfasShahid Bahonar University of Kermanمجله بیوتکنولوژی کشاورزی2228-67052228-65002020-10-0112311714010.22103/jab.2020.15177.11912736Study of genetic diversity of some genotypes of iranian wild mint (Mentha longifolia L.) using ISSR marker and its correlation with dry yield and essential oil contentAlireza Moshrefi-Araghi0Hossein Nemati1Majid Azizi2nasrin Meshkani3Mahmood Shoor4Department of horticulture, faculty of agriculture, ferdowsi university of mashhad, mashhad, Iran.Assistant Professor, Department of Horticulture Sciences, Faculty of Agriculture,Department of horticulture, faculty of agriculture, ferdowsi university of mashhadAssociated Professor, Department of Plant Science and Biotechnology, Faculty of Agriculture,Associated Professor, Department of Horticulture Sciences, Faculty of Agriculture, Ferdowsi University of Mashhad,Objective This study aimed to investigate the genetic diversity of different genotypes of this valuable medicinal plant under the same culture condition which can be used as an introduction to domestication, germplasm conservation, and possible cross in the future.   Materials and Methods In this study, after preparing 20 different genotypes from all over Iran, they were cultivated in complete randomized blocks design with three replications under the same condition. After extraction of DNA, the survey of genetic diversity using 12 ISSR markers from 15 markers was conducted by polymerase chain reaction (PCR). The essential oil for each genotype was extracted by water distillation. The dry yield based on gr/m2 and essential oil content (w/w, based on dry weight) were measured. Furthermore, the correlation of molecular markers with dry yield and essential oil content from each genotype was determined using stepwise regression.    Results The mean percentage of polymorphism determined in all the genotypes was 91.97. The number of polymorphic bands for each primer varied from 5 to 9 and a total of 89 replicate bands were scored, of which 82 bands showed polymorphism. The average content of primer information polymorphism (PIC) was estimated to be 0.31 and the IS1 primer showed the highest PIC (0.46). The Ni and Shannon indices for IS1 primers were 0.43 and 0.61, respectively. Cluster analysis using the Jaccard similarity coefficient and UPGMA algorithm divided the studied genotypes into four groups. The highest genetic distance was observed between Khuzestan and Qazvin genotypes with a coefficient of 0.39 and the lowest between Kerman-2 and Kerman-4 genotypes with a similarity coefficient of 0.77. Stepwise regression showed that the IS10 primer has a coefficient of 0.70 with the essential oil percentage and dry matter yield.   Conclusion The results of this study showed that ISSR markers can be effectively used to study the genetic diversity of wild mint genotypes and will provide the possibility of breeding. So that, IS1 and IS10 primers were introduced as the best markers. Also, Khuzestan and Qazvin genotypes had the highest genetic distance.https://jab.uk.ac.ir/article_2736_8f4aa73d74514055d002677523a6a2a1.pdfbreedinggenetic diversitymarkerwild mint
collection DOAJ
language fas
format Article
sources DOAJ
author Alireza Moshrefi-Araghi
Hossein Nemati
Majid Azizi
nasrin Meshkani
Mahmood Shoor
spellingShingle Alireza Moshrefi-Araghi
Hossein Nemati
Majid Azizi
nasrin Meshkani
Mahmood Shoor
Study of genetic diversity of some genotypes of iranian wild mint (Mentha longifolia L.) using ISSR marker and its correlation with dry yield and essential oil content
مجله بیوتکنولوژی کشاورزی
breeding
genetic diversity
marker
wild mint
author_facet Alireza Moshrefi-Araghi
Hossein Nemati
Majid Azizi
nasrin Meshkani
Mahmood Shoor
author_sort Alireza Moshrefi-Araghi
title Study of genetic diversity of some genotypes of iranian wild mint (Mentha longifolia L.) using ISSR marker and its correlation with dry yield and essential oil content
title_short Study of genetic diversity of some genotypes of iranian wild mint (Mentha longifolia L.) using ISSR marker and its correlation with dry yield and essential oil content
title_full Study of genetic diversity of some genotypes of iranian wild mint (Mentha longifolia L.) using ISSR marker and its correlation with dry yield and essential oil content
title_fullStr Study of genetic diversity of some genotypes of iranian wild mint (Mentha longifolia L.) using ISSR marker and its correlation with dry yield and essential oil content
title_full_unstemmed Study of genetic diversity of some genotypes of iranian wild mint (Mentha longifolia L.) using ISSR marker and its correlation with dry yield and essential oil content
title_sort study of genetic diversity of some genotypes of iranian wild mint (mentha longifolia l.) using issr marker and its correlation with dry yield and essential oil content
publisher Shahid Bahonar University of Kerman
series مجله بیوتکنولوژی کشاورزی
issn 2228-6705
2228-6500
publishDate 2020-10-01
description Objective This study aimed to investigate the genetic diversity of different genotypes of this valuable medicinal plant under the same culture condition which can be used as an introduction to domestication, germplasm conservation, and possible cross in the future.   Materials and Methods In this study, after preparing 20 different genotypes from all over Iran, they were cultivated in complete randomized blocks design with three replications under the same condition. After extraction of DNA, the survey of genetic diversity using 12 ISSR markers from 15 markers was conducted by polymerase chain reaction (PCR). The essential oil for each genotype was extracted by water distillation. The dry yield based on gr/m2 and essential oil content (w/w, based on dry weight) were measured. Furthermore, the correlation of molecular markers with dry yield and essential oil content from each genotype was determined using stepwise regression.    Results The mean percentage of polymorphism determined in all the genotypes was 91.97. The number of polymorphic bands for each primer varied from 5 to 9 and a total of 89 replicate bands were scored, of which 82 bands showed polymorphism. The average content of primer information polymorphism (PIC) was estimated to be 0.31 and the IS1 primer showed the highest PIC (0.46). The Ni and Shannon indices for IS1 primers were 0.43 and 0.61, respectively. Cluster analysis using the Jaccard similarity coefficient and UPGMA algorithm divided the studied genotypes into four groups. The highest genetic distance was observed between Khuzestan and Qazvin genotypes with a coefficient of 0.39 and the lowest between Kerman-2 and Kerman-4 genotypes with a similarity coefficient of 0.77. Stepwise regression showed that the IS10 primer has a coefficient of 0.70 with the essential oil percentage and dry matter yield.   Conclusion The results of this study showed that ISSR markers can be effectively used to study the genetic diversity of wild mint genotypes and will provide the possibility of breeding. So that, IS1 and IS10 primers were introduced as the best markers. Also, Khuzestan and Qazvin genotypes had the highest genetic distance.
topic breeding
genetic diversity
marker
wild mint
url https://jab.uk.ac.ir/article_2736_8f4aa73d74514055d002677523a6a2a1.pdf
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