PathCORE-T: identifying and visualizing globally co-occurring pathways in large transcriptomic compendia

PathCORE-T: identifying and visualizing globally co-occurring pathways in large transcriptomic compendia

Abstract Background Investigators often interpret genome-wide data by analyzing the expression levels of genes within pathways. While this within-pathway analysis is routine, the products of any one pathway can affect the activity of other pathways. Past efforts to identify relationships between bio...

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Bibliographic Details
Main Authors: Kathleen M. Chen, Jie Tan, Gregory P. Way, Georgia Doing, Deborah A. Hogan, Casey S. Greene
Format: Article
Language:English
Published: BMC 2018-07-01
Series:BioData Mining
Subjects:
Gene expression
Unsupervised feature construction
Crosstalk
Pathway interactions
Online Access:http://link.springer.com/article/10.1186/s13040-018-0175-7

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