Multiple Disease Risk Assessment With Uniform Model Based on Medical Clinical Notes

Unstructured clinical medical text, as an important part of the electronic health records, is characterized by large quantities and can store substantial disease-related information of patients. Currently, the disease risk assessment model based on the analysis of clinical medical text designs relev...

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Main Authors: Xiaobo Shi, Ying Hu, Yin Zhang, Wei Li, Yixue Hao, Abdulhameed Alelaiwi, Sk Md Mizanur Rahman, M. Shamim Hossain
Format: Article
Language:English
Published: IEEE 2016-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/7579594/
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spelling doaj-7e00af7708f444c7820bf14a4f8d34482021-03-29T19:45:58ZengIEEEIEEE Access2169-35362016-01-0147074708310.1109/ACCESS.2016.26145417579594Multiple Disease Risk Assessment With Uniform Model Based on Medical Clinical NotesXiaobo Shi0Ying Hu1Yin Zhang2https://orcid.org/0000-0002-1772-0763Wei Li3Yixue Hao4Abdulhameed Alelaiwi5Sk Md Mizanur Rahman6M. Shamim Hossain7School of Computer Science and Technology, Huazhong University of Science and Technology, Wuhan, ChinaSchool of Computer Science and Technology, Huazhong University of Science and Technology, Wuhan, ChinaSchool of Information and Safety Engineering, Zhongnan University of Economics and Law, Wuhan, ChinaSchool of Computer Science and Technology, Huazhong University of Science and Technology, Wuhan, ChinaSchool of Computer Science and Technology, Huazhong University of Science and Technology, Wuhan, ChinaDepartment of Software Engineering, College of Computer and Information Sciences, King Saud University, Riyadh, Saudi ArabiaDepartment of Information Systems Department, College of Computer and Information Sciences, King Saud University, Riyadh, Saudi ArabiaDepartment of Software Engineering, College of Computer and Information Sciences, King Saud University, Riyadh, Saudi ArabiaUnstructured clinical medical text, as an important part of the electronic health records, is characterized by large quantities and can store substantial disease-related information of patients. Currently, the disease risk assessment model based on the analysis of clinical medical text designs relevant characteristics aiming at certain diseases, and different characteristics are identified from the text using different methods. In this way, changes of disease performance characteristics are difficult to adapt. Furthermore, it is hard to use the risk assessment model in other disease applications. As a result, this paper establishes the universal disease risk assessment model using the data of clinical medical text, conducts the independent study, and extracts disease characteristics from substantial historical data to avoid the limitations designing disease characteristics. First, this paper analyzes the medial clinical text to determine the contents related to the disease characteristics of patients. Second, learn the representation of clinical text with unsupervised learning methods, and study and extract the disease characteristics from the substantial historical data of patients in the convolutional neural network to assess disease risks. Finally, make a contrast experiment of disease risk assessment using the clinical text data of patients with cerebral infarction, patients with pulmonary infection, and patients with coronary atherosclerotic heart disease from the data of a second grade-A hospital in China and related methods. The experiments show that the approach proposed in this paper achieves the disease risk assessment for different diseases with the same structure.https://ieeexplore.ieee.org/document/7579594/Disease risk assessmentmedical clinical notestext representation learningconvolutional neural network
collection DOAJ
language English
format Article
sources DOAJ
author Xiaobo Shi
Ying Hu
Yin Zhang
Wei Li
Yixue Hao
Abdulhameed Alelaiwi
Sk Md Mizanur Rahman
M. Shamim Hossain
spellingShingle Xiaobo Shi
Ying Hu
Yin Zhang
Wei Li
Yixue Hao
Abdulhameed Alelaiwi
Sk Md Mizanur Rahman
M. Shamim Hossain
Multiple Disease Risk Assessment With Uniform Model Based on Medical Clinical Notes
IEEE Access
Disease risk assessment
medical clinical notes
text representation learning
convolutional neural network
author_facet Xiaobo Shi
Ying Hu
Yin Zhang
Wei Li
Yixue Hao
Abdulhameed Alelaiwi
Sk Md Mizanur Rahman
M. Shamim Hossain
author_sort Xiaobo Shi
title Multiple Disease Risk Assessment With Uniform Model Based on Medical Clinical Notes
title_short Multiple Disease Risk Assessment With Uniform Model Based on Medical Clinical Notes
title_full Multiple Disease Risk Assessment With Uniform Model Based on Medical Clinical Notes
title_fullStr Multiple Disease Risk Assessment With Uniform Model Based on Medical Clinical Notes
title_full_unstemmed Multiple Disease Risk Assessment With Uniform Model Based on Medical Clinical Notes
title_sort multiple disease risk assessment with uniform model based on medical clinical notes
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2016-01-01
description Unstructured clinical medical text, as an important part of the electronic health records, is characterized by large quantities and can store substantial disease-related information of patients. Currently, the disease risk assessment model based on the analysis of clinical medical text designs relevant characteristics aiming at certain diseases, and different characteristics are identified from the text using different methods. In this way, changes of disease performance characteristics are difficult to adapt. Furthermore, it is hard to use the risk assessment model in other disease applications. As a result, this paper establishes the universal disease risk assessment model using the data of clinical medical text, conducts the independent study, and extracts disease characteristics from substantial historical data to avoid the limitations designing disease characteristics. First, this paper analyzes the medial clinical text to determine the contents related to the disease characteristics of patients. Second, learn the representation of clinical text with unsupervised learning methods, and study and extract the disease characteristics from the substantial historical data of patients in the convolutional neural network to assess disease risks. Finally, make a contrast experiment of disease risk assessment using the clinical text data of patients with cerebral infarction, patients with pulmonary infection, and patients with coronary atherosclerotic heart disease from the data of a second grade-A hospital in China and related methods. The experiments show that the approach proposed in this paper achieves the disease risk assessment for different diseases with the same structure.
topic Disease risk assessment
medical clinical notes
text representation learning
convolutional neural network
url https://ieeexplore.ieee.org/document/7579594/
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