Comparison of methods for estimating the attributable risk in the context of survival analysis

Abstract Background The attributable risk (AR) measures the proportion of disease cases that can be attributed to an exposure in the population. Several definitions and estimation methods have been proposed for survival data. Methods Using simulations, we compared four methods for estimating AR defi...

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Main Authors: Malamine Gassama, Jacques Bénichou, Laureen Dartois, Anne C. M. Thiébaut
Format: Article
Language:English
Published: BMC 2017-01-01
Series:BMC Medical Research Methodology
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12874-016-0285-1
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spelling doaj-7df9486d2bc74d90ab7dd2046a0094982020-11-24T23:02:35ZengBMCBMC Medical Research Methodology1471-22882017-01-0117111110.1186/s12874-016-0285-1Comparison of methods for estimating the attributable risk in the context of survival analysisMalamine Gassama0Jacques Bénichou1Laureen Dartois2Anne C. M. Thiébaut3Université Paris-Saclay, Biostatistics, Biomathematics, Pharmacoepidemiology and Infectious Diseases (B2PHI), Inserm, UVSQ, Institut PasteurUniversity of Rouen, Inserm, U 1219Université Paris-Saclay, CESP, Fac. de médecine - Univ. Paris-Sud, Fac. de médecine - UVSQ, INSERMUniversité Paris-Saclay, Biostatistics, Biomathematics, Pharmacoepidemiology and Infectious Diseases (B2PHI), Inserm, UVSQ, Institut PasteurAbstract Background The attributable risk (AR) measures the proportion of disease cases that can be attributed to an exposure in the population. Several definitions and estimation methods have been proposed for survival data. Methods Using simulations, we compared four methods for estimating AR defined in terms of survival functions: two nonparametric methods based on Kaplan-Meier’s estimator, one semiparametric based on Cox’s model, and one parametric based on the piecewise constant hazards model, as well as one simpler method based on estimated exposure prevalence at baseline and Cox’s model hazard ratio. We considered a fixed binary exposure with varying exposure probabilities and strengths of association, and generated event times from a proportional hazards model with constant or monotonic (decreasing or increasing) Weibull baseline hazard, as well as from a nonproportional hazards model. We simulated 1,000 independent samples of size 1,000 or 10,000. The methods were compared in terms of mean bias, mean estimated standard error, empirical standard deviation and 95% confidence interval coverage probability at four equally spaced time points. Results Under proportional hazards, all five methods yielded unbiased results regardless of sample size. Nonparametric methods displayed greater variability than other approaches. All methods showed satisfactory coverage except for nonparametric methods at the end of follow-up for a sample size of 1,000 especially. With nonproportional hazards, nonparametric methods yielded similar results to those under proportional hazards, whereas semiparametric and parametric approaches that both relied on the proportional hazards assumption performed poorly. These methods were applied to estimate the AR of breast cancer due to menopausal hormone therapy in 38,359 women of the E3N cohort. Conclusion In practice, our study suggests to use the semiparametric or parametric approaches to estimate AR as a function of time in cohort studies if the proportional hazards assumption appears appropriate.http://link.springer.com/article/10.1186/s12874-016-0285-1Attributable riskWeighted Kaplan-Meier estimatorPiecewise constant hazards modelCox modelCohort studiesBreast cancer
collection DOAJ
language English
format Article
sources DOAJ
author Malamine Gassama
Jacques Bénichou
Laureen Dartois
Anne C. M. Thiébaut
spellingShingle Malamine Gassama
Jacques Bénichou
Laureen Dartois
Anne C. M. Thiébaut
Comparison of methods for estimating the attributable risk in the context of survival analysis
BMC Medical Research Methodology
Attributable risk
Weighted Kaplan-Meier estimator
Piecewise constant hazards model
Cox model
Cohort studies
Breast cancer
author_facet Malamine Gassama
Jacques Bénichou
Laureen Dartois
Anne C. M. Thiébaut
author_sort Malamine Gassama
title Comparison of methods for estimating the attributable risk in the context of survival analysis
title_short Comparison of methods for estimating the attributable risk in the context of survival analysis
title_full Comparison of methods for estimating the attributable risk in the context of survival analysis
title_fullStr Comparison of methods for estimating the attributable risk in the context of survival analysis
title_full_unstemmed Comparison of methods for estimating the attributable risk in the context of survival analysis
title_sort comparison of methods for estimating the attributable risk in the context of survival analysis
publisher BMC
series BMC Medical Research Methodology
issn 1471-2288
publishDate 2017-01-01
description Abstract Background The attributable risk (AR) measures the proportion of disease cases that can be attributed to an exposure in the population. Several definitions and estimation methods have been proposed for survival data. Methods Using simulations, we compared four methods for estimating AR defined in terms of survival functions: two nonparametric methods based on Kaplan-Meier’s estimator, one semiparametric based on Cox’s model, and one parametric based on the piecewise constant hazards model, as well as one simpler method based on estimated exposure prevalence at baseline and Cox’s model hazard ratio. We considered a fixed binary exposure with varying exposure probabilities and strengths of association, and generated event times from a proportional hazards model with constant or monotonic (decreasing or increasing) Weibull baseline hazard, as well as from a nonproportional hazards model. We simulated 1,000 independent samples of size 1,000 or 10,000. The methods were compared in terms of mean bias, mean estimated standard error, empirical standard deviation and 95% confidence interval coverage probability at four equally spaced time points. Results Under proportional hazards, all five methods yielded unbiased results regardless of sample size. Nonparametric methods displayed greater variability than other approaches. All methods showed satisfactory coverage except for nonparametric methods at the end of follow-up for a sample size of 1,000 especially. With nonproportional hazards, nonparametric methods yielded similar results to those under proportional hazards, whereas semiparametric and parametric approaches that both relied on the proportional hazards assumption performed poorly. These methods were applied to estimate the AR of breast cancer due to menopausal hormone therapy in 38,359 women of the E3N cohort. Conclusion In practice, our study suggests to use the semiparametric or parametric approaches to estimate AR as a function of time in cohort studies if the proportional hazards assumption appears appropriate.
topic Attributable risk
Weighted Kaplan-Meier estimator
Piecewise constant hazards model
Cox model
Cohort studies
Breast cancer
url http://link.springer.com/article/10.1186/s12874-016-0285-1
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