Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%

<p>Abstract</p> <p>Background</p> <p>Investigation of the <it>OPA1</it> mutation spectrum in autosomal dominant optic atrophy (ADOA) in Denmark.</p> <p>Methods</p> <p>Index patients from 93 unrelated ADOA families were assessed for a...

Full description

Bibliographic Details
Main Authors: Almind Gitte J, Ek Jakob, Rosenberg Thomas, Eiberg Hans, Larsen Michael, LuCamp LuCamp, Brøndum-Nielsen Karen, Grønskov Karen
Format: Article
Language:English
Published: BMC 2012-08-01
Series:BMC Medical Genetics
Subjects:
Online Access:http://www.biomedcentral.com/1471-2350/13/65
id doaj-7ddb8b3a2de040928da8e0fb0a3a984b
record_format Article
spelling doaj-7ddb8b3a2de040928da8e0fb0a3a984b2021-04-02T16:40:39ZengBMCBMC Medical Genetics1471-23502012-08-011316510.1186/1471-2350-13-65Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%Almind Gitte JEk JakobRosenberg ThomasEiberg HansLarsen MichaelLuCamp LuCampBrøndum-Nielsen KarenGrønskov Karen<p>Abstract</p> <p>Background</p> <p>Investigation of the <it>OPA1</it> mutation spectrum in autosomal dominant optic atrophy (ADOA) in Denmark.</p> <p>Methods</p> <p>Index patients from 93 unrelated ADOA families were assessed for a common Danish founder mutation (c.2826_2836delinsGGATGCTCCA) in<it>OPA1</it>. If negative, direct DNA sequencing of the coding sequence and multiplex ligation-dependent probe amplification (MLPA) were performed. Results from MLPA analysis have been previously reported. Haplotype analysis was carried out analysing single nucleotide polymorphisms (SNP). Retrospective clinical data were retrieved from medical files.</p> <p>Results</p> <p>Probably causative mutations were identified in 84 out of 93 families (90%) including 15 novel mutations. Three mutations c.983A > G, c.2708_2711delTTAG and c.2826_2836delinsGGATGCTCCA, were responsible for ADOA in10, 11 and 28 families, respectively, corresponding to 11%, 12% and 30%. A common haplotype in nine of ten c.983A > G families suggests that they descend from a single founder. The c.2708_2711delTTAG mutation was present on at least two haplotypes and has been repeatedly reported in various ethnic groups,thus represents a mutational hotspot. Clinical examinations of index patients with the two latter mutations demonstrated large inter- and intra-familial variations apparently.</p> <p>Conclusions</p> <p>Genetic testing for <it>OPA1</it>mutations assist in the diagnosis. We have identified mutations in <it>OPA1</it> in 90% of families including 15 novel mutations. Both DNA sequencing and MLPA analysis are necessary to achieve a high detection rate. More than half of the affected families in Denmark are represented by three common mutations, at least two of which are due to a founder effect, which may account for the high prevalence of ADOA in Denmark.</p> http://www.biomedcentral.com/1471-2350/13/65OPA1, Optic atrophy, Optic atrophies, Hereditary, Autosomal dominant, ADOA, Genetics, Optic neuropathies, Optic nerve, GenotypePhenotype
collection DOAJ
language English
format Article
sources DOAJ
author Almind Gitte J
Ek Jakob
Rosenberg Thomas
Eiberg Hans
Larsen Michael
LuCamp LuCamp
Brøndum-Nielsen Karen
Grønskov Karen
spellingShingle Almind Gitte J
Ek Jakob
Rosenberg Thomas
Eiberg Hans
Larsen Michael
LuCamp LuCamp
Brøndum-Nielsen Karen
Grønskov Karen
Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%
BMC Medical Genetics
OPA1, Optic atrophy, Optic atrophies, Hereditary, Autosomal dominant, ADOA, Genetics, Optic neuropathies, Optic nerve, Genotype
Phenotype
author_facet Almind Gitte J
Ek Jakob
Rosenberg Thomas
Eiberg Hans
Larsen Michael
LuCamp LuCamp
Brøndum-Nielsen Karen
Grønskov Karen
author_sort Almind Gitte J
title Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%
title_short Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%
title_full Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%
title_fullStr Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%
title_full_unstemmed Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%
title_sort dominant optic atrophy in denmark – report of 15 novel mutations in <it>opa1</it>, using a strategy with a detection rate of 90%
publisher BMC
series BMC Medical Genetics
issn 1471-2350
publishDate 2012-08-01
description <p>Abstract</p> <p>Background</p> <p>Investigation of the <it>OPA1</it> mutation spectrum in autosomal dominant optic atrophy (ADOA) in Denmark.</p> <p>Methods</p> <p>Index patients from 93 unrelated ADOA families were assessed for a common Danish founder mutation (c.2826_2836delinsGGATGCTCCA) in<it>OPA1</it>. If negative, direct DNA sequencing of the coding sequence and multiplex ligation-dependent probe amplification (MLPA) were performed. Results from MLPA analysis have been previously reported. Haplotype analysis was carried out analysing single nucleotide polymorphisms (SNP). Retrospective clinical data were retrieved from medical files.</p> <p>Results</p> <p>Probably causative mutations were identified in 84 out of 93 families (90%) including 15 novel mutations. Three mutations c.983A > G, c.2708_2711delTTAG and c.2826_2836delinsGGATGCTCCA, were responsible for ADOA in10, 11 and 28 families, respectively, corresponding to 11%, 12% and 30%. A common haplotype in nine of ten c.983A > G families suggests that they descend from a single founder. The c.2708_2711delTTAG mutation was present on at least two haplotypes and has been repeatedly reported in various ethnic groups,thus represents a mutational hotspot. Clinical examinations of index patients with the two latter mutations demonstrated large inter- and intra-familial variations apparently.</p> <p>Conclusions</p> <p>Genetic testing for <it>OPA1</it>mutations assist in the diagnosis. We have identified mutations in <it>OPA1</it> in 90% of families including 15 novel mutations. Both DNA sequencing and MLPA analysis are necessary to achieve a high detection rate. More than half of the affected families in Denmark are represented by three common mutations, at least two of which are due to a founder effect, which may account for the high prevalence of ADOA in Denmark.</p>
topic OPA1, Optic atrophy, Optic atrophies, Hereditary, Autosomal dominant, ADOA, Genetics, Optic neuropathies, Optic nerve, Genotype
Phenotype
url http://www.biomedcentral.com/1471-2350/13/65
work_keys_str_mv AT almindgittej dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90
AT ekjakob dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90
AT rosenbergthomas dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90
AT eiberghans dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90
AT larsenmichael dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90
AT lucamplucamp dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90
AT brøndumnielsenkaren dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90
AT grønskovkaren dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90
_version_ 1721555858839568384