Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%
<p>Abstract</p> <p>Background</p> <p>Investigation of the <it>OPA1</it> mutation spectrum in autosomal dominant optic atrophy (ADOA) in Denmark.</p> <p>Methods</p> <p>Index patients from 93 unrelated ADOA families were assessed for a...
Main Authors: | , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2012-08-01
|
Series: | BMC Medical Genetics |
Subjects: | |
Online Access: | http://www.biomedcentral.com/1471-2350/13/65 |
id |
doaj-7ddb8b3a2de040928da8e0fb0a3a984b |
---|---|
record_format |
Article |
spelling |
doaj-7ddb8b3a2de040928da8e0fb0a3a984b2021-04-02T16:40:39ZengBMCBMC Medical Genetics1471-23502012-08-011316510.1186/1471-2350-13-65Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90%Almind Gitte JEk JakobRosenberg ThomasEiberg HansLarsen MichaelLuCamp LuCampBrøndum-Nielsen KarenGrønskov Karen<p>Abstract</p> <p>Background</p> <p>Investigation of the <it>OPA1</it> mutation spectrum in autosomal dominant optic atrophy (ADOA) in Denmark.</p> <p>Methods</p> <p>Index patients from 93 unrelated ADOA families were assessed for a common Danish founder mutation (c.2826_2836delinsGGATGCTCCA) in<it>OPA1</it>. If negative, direct DNA sequencing of the coding sequence and multiplex ligation-dependent probe amplification (MLPA) were performed. Results from MLPA analysis have been previously reported. Haplotype analysis was carried out analysing single nucleotide polymorphisms (SNP). Retrospective clinical data were retrieved from medical files.</p> <p>Results</p> <p>Probably causative mutations were identified in 84 out of 93 families (90%) including 15 novel mutations. Three mutations c.983A > G, c.2708_2711delTTAG and c.2826_2836delinsGGATGCTCCA, were responsible for ADOA in10, 11 and 28 families, respectively, corresponding to 11%, 12% and 30%. A common haplotype in nine of ten c.983A > G families suggests that they descend from a single founder. The c.2708_2711delTTAG mutation was present on at least two haplotypes and has been repeatedly reported in various ethnic groups,thus represents a mutational hotspot. Clinical examinations of index patients with the two latter mutations demonstrated large inter- and intra-familial variations apparently.</p> <p>Conclusions</p> <p>Genetic testing for <it>OPA1</it>mutations assist in the diagnosis. We have identified mutations in <it>OPA1</it> in 90% of families including 15 novel mutations. Both DNA sequencing and MLPA analysis are necessary to achieve a high detection rate. More than half of the affected families in Denmark are represented by three common mutations, at least two of which are due to a founder effect, which may account for the high prevalence of ADOA in Denmark.</p> http://www.biomedcentral.com/1471-2350/13/65OPA1, Optic atrophy, Optic atrophies, Hereditary, Autosomal dominant, ADOA, Genetics, Optic neuropathies, Optic nerve, GenotypePhenotype |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Almind Gitte J Ek Jakob Rosenberg Thomas Eiberg Hans Larsen Michael LuCamp LuCamp Brøndum-Nielsen Karen Grønskov Karen |
spellingShingle |
Almind Gitte J Ek Jakob Rosenberg Thomas Eiberg Hans Larsen Michael LuCamp LuCamp Brøndum-Nielsen Karen Grønskov Karen Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90% BMC Medical Genetics OPA1, Optic atrophy, Optic atrophies, Hereditary, Autosomal dominant, ADOA, Genetics, Optic neuropathies, Optic nerve, Genotype Phenotype |
author_facet |
Almind Gitte J Ek Jakob Rosenberg Thomas Eiberg Hans Larsen Michael LuCamp LuCamp Brøndum-Nielsen Karen Grønskov Karen |
author_sort |
Almind Gitte J |
title |
Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90% |
title_short |
Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90% |
title_full |
Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90% |
title_fullStr |
Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90% |
title_full_unstemmed |
Dominant optic atrophy in Denmark – report of 15 novel mutations in <it>OPA1</it>, using a strategy with a detection rate of 90% |
title_sort |
dominant optic atrophy in denmark – report of 15 novel mutations in <it>opa1</it>, using a strategy with a detection rate of 90% |
publisher |
BMC |
series |
BMC Medical Genetics |
issn |
1471-2350 |
publishDate |
2012-08-01 |
description |
<p>Abstract</p> <p>Background</p> <p>Investigation of the <it>OPA1</it> mutation spectrum in autosomal dominant optic atrophy (ADOA) in Denmark.</p> <p>Methods</p> <p>Index patients from 93 unrelated ADOA families were assessed for a common Danish founder mutation (c.2826_2836delinsGGATGCTCCA) in<it>OPA1</it>. If negative, direct DNA sequencing of the coding sequence and multiplex ligation-dependent probe amplification (MLPA) were performed. Results from MLPA analysis have been previously reported. Haplotype analysis was carried out analysing single nucleotide polymorphisms (SNP). Retrospective clinical data were retrieved from medical files.</p> <p>Results</p> <p>Probably causative mutations were identified in 84 out of 93 families (90%) including 15 novel mutations. Three mutations c.983A > G, c.2708_2711delTTAG and c.2826_2836delinsGGATGCTCCA, were responsible for ADOA in10, 11 and 28 families, respectively, corresponding to 11%, 12% and 30%. A common haplotype in nine of ten c.983A > G families suggests that they descend from a single founder. The c.2708_2711delTTAG mutation was present on at least two haplotypes and has been repeatedly reported in various ethnic groups,thus represents a mutational hotspot. Clinical examinations of index patients with the two latter mutations demonstrated large inter- and intra-familial variations apparently.</p> <p>Conclusions</p> <p>Genetic testing for <it>OPA1</it>mutations assist in the diagnosis. We have identified mutations in <it>OPA1</it> in 90% of families including 15 novel mutations. Both DNA sequencing and MLPA analysis are necessary to achieve a high detection rate. More than half of the affected families in Denmark are represented by three common mutations, at least two of which are due to a founder effect, which may account for the high prevalence of ADOA in Denmark.</p> |
topic |
OPA1, Optic atrophy, Optic atrophies, Hereditary, Autosomal dominant, ADOA, Genetics, Optic neuropathies, Optic nerve, Genotype Phenotype |
url |
http://www.biomedcentral.com/1471-2350/13/65 |
work_keys_str_mv |
AT almindgittej dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90 AT ekjakob dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90 AT rosenbergthomas dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90 AT eiberghans dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90 AT larsenmichael dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90 AT lucamplucamp dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90 AT brøndumnielsenkaren dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90 AT grønskovkaren dominantopticatrophyindenmarkreportof15novelmutationsinitopa1itusingastrategywithadetectionrateof90 |
_version_ |
1721555858839568384 |